RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 USP19O94966 1318 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 NEFHP12036 1026 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 CRKLP46109 303 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 EIF4A1P60842 406 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 TNNI3KQ59H18 835 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 FPGT-TNNI3KV9GXZ4 949 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 CDC42BPBQ9Y5S2 1711 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 PRKCSHP14314 528 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 MCM4P33991 863 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 STAT6P42226 847 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 HSP90AA2PQ14568 343 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 DCTPP1Q9H773 170 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 WDR17Q8IZU2 1322 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RAD50Q92878 1312 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 USP6P35125 1406 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 GOLGA6L10A6NI86 522 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 USP8P40818 1118 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 SEPT7Q16181 437 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 BRDTQ58F21 947 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 FILIP1Q7Z7B0 1213 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 DDX19AQ9NUU7 478 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 SYCE3A1L190 88 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 HELLSQ9NRZ9 838 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RBM28Q9NW13 759 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 RMND1Q9NWS8 449 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 PATL2C9JE40 543 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 PER1O15534 1290 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 TCEANC2Q96MN5 208 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 PANK2Q9BZ23 570 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 SKAP1Q86WV1 359 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 GOPCQ9HD26 462 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 ERBB4Q15303 1308 aa5.7□□□□□ -1.5
HDAC9-204ENST00000406451 ENOX2Q16206 610 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 PUF60Q9UHX1 559 aaKnown RBP5.7□□□□□ -1.5
HDAC9-204ENST00000406451 AATFQ9NY61 560 aaKnown RBP eCLIP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TFIP11Q9UBB9 837 aaKnown RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 KRT2P35908 639 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TIMM10P62072 90 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SKIDA1Q1XH10 827 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SEPT12Q8IYM1 358 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 NECAB1Q8N987 351 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 BACH1O14867 736 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SFPQP23246 707 aaKnown RBP eCLIP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 MFSD14BQ5SR56 506 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 PRDM15P57071 1507 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 ANKRD62A6NC57 917 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 GIGYF1O75420 1035 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 ARHGEF25Q86VW2 580 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SPATA5Q8NB90 893 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 CSADQ9Y600 493 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 ABCA9Q8IUA7 1624 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 NEURL1BA8MQ27 555 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 PRKG1Q13976 671 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 STX1AQ16623 288 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 KCNG4Q8TDN1 519 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 NUP88Q99567 741 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 ZBTB40Q9NUA8 1239 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SSFA2P28290 1259 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 MAP3K9P80192 1104 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TCP10Q12799 353 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 APBB1IPQ7Z5R6 666 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TEKT1Q969V4 418 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SUCLG2Q96I99 432 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TRIM35Q9UPQ4 493 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 KDRP35968 1356 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 SYKP43405 635 aa5.69□□□□□ -1.5
HDAC9-204ENST00000406451 TDRD12Q587J7 1177 aaKnown RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 THRAP3Q9Y2W1 955 aaKnown RBP5.69□□□□□ -1.5
HDAC9-204ENST00000406451 PHACTR2O75167 634 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 PPM1FP49593 454 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 IRX3P78415 501 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 CREB3L3Q68CJ9 461 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 ARMT1Q9H993 441 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 GPCPD1Q9NPB8 672 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 KLHDC4Q8TBB5 520 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 TCHPQ9BT92 498 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 NOD1Q9Y239 953 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 CROCC2H7BZ55 1655 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 KRT13P13646 458 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 SP4Q02446 784 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 ZRSR2Q15696 482 aaKnown RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 GPHNQ9NQX3 736 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 TTF2Q9UNY4 1162 aaKnown RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 BLMP54132 1417 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 IBTKQ9P2D0 1353 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 BIN1O00499 593 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 RLBP1P12271 317 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 BRINP3Q76B58 766 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 DHX32Q7L7V1 743 aaKnown RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 CHST3Q7LGC8 479 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 SMCR8Q8TEV9 937 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-204ENST00000406451 TRIM47Q96LD4 638 aa5.68□□□□□ -1.5
HDAC9-204ENST00000406451 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms