RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HSP90AB3PQ58FF7 597 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 TAF1P21675 1872 aa11.6□□□□□ -0.55
MSH2-202ENST00000406134 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
MSH2-202ENST00000406134 FOSBP53539 338 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 MYH6P13533 1939 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
MSH2-202ENST00000406134 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 HSP90B1P14625 803 aaKnown RBP11.59□□□□□ -0.55
MSH2-202ENST00000406134 FAM13BQ9NYF5 915 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
MSH2-202ENST00000406134 KIF28PB7ZC32 967 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 MCAMP43121 646 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 HLFQ16534 295 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 PRIMPOLQ96LW4 560 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
MSH2-202ENST00000406134 FGAP02671 866 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 ZAP70P43403 619 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 CEBPZQ03701 1054 aaKnown RBP11.58□□□□□ -0.56
MSH2-202ENST00000406134 SARM1Q6SZW1 724 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
MSH2-202ENST00000406134 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 MYH2Q9UKX2 1941 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 NRAPQ86VF7 1730 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 ZSCAN25Q6NSZ9 544 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 FAM89AQ96GI7 184 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 ASAP1Q9ULH1 1129 aa11.58□□□□□ -0.56
MSH2-202ENST00000406134 COL14A1Q05707 1796 aaKnown RBP11.57□□□□□ -0.56
MSH2-202ENST00000406134 IL2RBP14784 551 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 GUCY1B3Q02153 619 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 ARID5BQ14865 1188 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 CACTINQ8WUQ7 758 aaKnown RBP11.57□□□□□ -0.56
MSH2-202ENST00000406134 ERCC4Q92889 916 aaPredicted RBP11.57□□□□□ -0.56
MSH2-202ENST00000406134 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 PCCAP05165 728 aaPredicted RBP11.57□□□□□ -0.56
MSH2-202ENST00000406134 CDC25BP30305 580 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 OTUD7BQ6GQQ9 843 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 CCDC186Q7Z3E2 898 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
MSH2-202ENST00000406134 PIGBQ92521 554 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 PCDHA7Q9UN72 937 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 SCN7AQ01118 1682 aa11.57□□□□□ -0.56
MSH2-202ENST00000406134 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 ZNF165P49910 485 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 NBPF11Q86T75 865 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 SENP2Q9HC62 589 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 CLIC4Q9Y696 253 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 TCRBV5S4A2TA0A5A2 114 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
MSH2-202ENST00000406134 HAND2P61296 217 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.56□□□□□ -0.56
MSH2-202ENST00000406134 BCL9O00512 1426 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 TBC1D10CQ8IV04 446 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 CCDC85AQ96PX6 553 aaPredicted RBP11.56□□□□□ -0.56
MSH2-202ENST00000406134 CFAP45Q9UL16 551 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 CACNA1SQ13698 1873 aa11.56□□□□□ -0.56
MSH2-202ENST00000406134 CDHR2Q9BYE9 1310 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 H3BQV1 296 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 DNAJC10Q8IXB1 793 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 ZBTB38Q8NAP3 1195 aaPredicted RBP11.55□□□□□ -0.56
MSH2-202ENST00000406134 RTEL1Q9NZ71 1219 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 LINC00301Q8NCQ3 95 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 HSD3B7Q9H2F3 369 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 GREM2Q9H772 168 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 PRDM11Q9NQV5 511 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
MSH2-202ENST00000406134 HSPA2P54652 639 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
MSH2-202ENST00000406134 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 BCL2L12Q9HB09 334 aa11.55□□□□□ -0.56
MSH2-202ENST00000406134 UBN2Q6ZU65 1347 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 NDUFA8P51970 172 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 AXDND1Q5T1B0 1012 aaPredicted RBP11.54□□□□□ -0.56
MSH2-202ENST00000406134 PIH1D3Q9NQM4 214 aaKnown RBP11.54□□□□□ -0.56
MSH2-202ENST00000406134 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 USP27XA6NNY8 438 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 APPBP2Q92624 585 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 GPAA1O43292 621 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 ADD2P35612 726 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
MSH2-202ENST00000406134 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
MSH2-202ENST00000406134 WDR19Q8NEZ3 1342 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 BAZ2AQ9UIF9 1905 aaKnown RBP11.53□□□□□ -0.56
MSH2-202ENST00000406134 UBE2Q2LH0YL09 131 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 CCZ1BP86790 482 aa11.53□□□□□ -0.56
MSH2-202ENST00000406134 CCZ1P86791 482 aaPredicted RBP11.53□□□□□ -0.56
MSH2-202ENST00000406134 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms