RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ERBB3P21860 1342 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 SCRN1Q12765 414 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 SEMA3FQ13275 785 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
DUSP28-202ENST00000405954 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 ANKRD1Q15327 319 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 CCDC114Q96M63 670 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 ABCC3O15438 1527 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
DUSP28-202ENST00000405954 IQUBQ8NA54 791 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
DUSP28-202ENST00000405954 PES1O00541 588 aaKnown RBP16.04■□□□□ 0.16
DUSP28-202ENST00000405954 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 VPS53Q5VIR6 699 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 CPLX2Q6PUV4 134 aaKnown RBP16.04■□□□□ 0.16
DUSP28-202ENST00000405954 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
DUSP28-202ENST00000405954 GNGT1P63211 74 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 G2E3Q7L622 706 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
DUSP28-202ENST00000405954 MSH6P52701 1360 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 MYO1FO00160 1098 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 ARHGAP6O43182 974 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 SKAP2O75563 359 aaPredicted RBP16.03■□□□□ 0.16
DUSP28-202ENST00000405954 UBTFL1P0CB47 393 aaPredicted RBP16.03■□□□□ 0.16
DUSP28-202ENST00000405954 MICALCLQ6ZW33 695 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 IQCA1Q86XH1 822 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
DUSP28-202ENST00000405954 POGZQ7Z3K3 1410 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
DUSP28-202ENST00000405954 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.03■□□□□ 0.16
DUSP28-202ENST00000405954 GOLGA6L7A0A1B0GV03 622 aa16.02■□□□□ 0.16
DUSP28-202ENST00000405954 CHUKO15111 745 aa16.02■□□□□ 0.16
DUSP28-202ENST00000405954 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.16
DUSP28-202ENST00000405954 DPCR1Q3MIW9 517 aa16.02■□□□□ 0.16
DUSP28-202ENST00000405954 CTAGE9A4FU28 777 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 EXOC5O00471 708 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 SRGAP1Q7Z6B7 1085 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.15
DUSP28-202ENST00000405954 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 ADGRB2O60241 1585 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 SGSM2O43147 1006 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.15
DUSP28-202ENST00000405954 JAK2O60674 1132 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 CCDC175P0C221 793 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 MTX1Q13505 466 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 STK11IPQ8N1F8 1099 aa16.02■□□□□ 0.15
DUSP28-202ENST00000405954 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.15
DUSP28-202ENST00000405954 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.15
DUSP28-202ENST00000405954 RPGRIP1LQ68CZ1 1315 aa16.01■□□□□ 0.15
DUSP28-202ENST00000405954 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
DUSP28-202ENST00000405954 STIM1Q13586 685 aa16.01■□□□□ 0.15
DUSP28-202ENST00000405954 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
DUSP28-202ENST00000405954 CCDC9Q9Y3X0 531 aaKnown RBP16.01■□□□□ 0.15
DUSP28-202ENST00000405954 TULP1O00294 542 aaPredicted RBP16.01■□□□□ 0.15
DUSP28-202ENST00000405954 KIF4AO95239 1232 aa16.01■□□□□ 0.15
DUSP28-202ENST00000405954 GSCP56915 257 aaPredicted RBP16.01■□□□□ 0.15
DUSP28-202ENST00000405954 IRX2Q9BZI1 471 aaPredicted RBP16.01■□□□□ 0.15
DUSP28-202ENST00000405954 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
DUSP28-202ENST00000405954 ATP1A3P13637 1013 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 IL13P35225 146 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 CCT4P50991 539 aaKnown RBP16■□□□□ 0.15
DUSP28-202ENST00000405954 TEX11Q8IYF3 940 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 MRPS27Q92552 414 aaKnown RBP16■□□□□ 0.15
DUSP28-202ENST00000405954 MYO6Q9UM54 1294 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 MICAL1Q8TDZ2 1067 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 COG3Q96JB2 828 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 NSD2O96028 1365 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 ZMYND10O75800 440 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
DUSP28-202ENST00000405954 MIEF2Q96C03 454 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 RSRC1Q96IZ7 334 aaKnown RBP16■□□□□ 0.15
DUSP28-202ENST00000405954 CAPS2Q9BXY5 557 aa16■□□□□ 0.15
DUSP28-202ENST00000405954 IGSF22Q8N9C0 903 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 KIAA1328Q86T90 577 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 HOMEZQ8IX15 550 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 KAT2BQ92831 832 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 CAPZA3Q96KX2 299 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 IL25Q9H293 177 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 RBM8AQ9Y5S9 174 aaKnown RBP15.99■□□□□ 0.15
DUSP28-202ENST00000405954 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
DUSP28-202ENST00000405954 PSME1Q06323 249 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 RBBP5Q15291 538 aaKnown RBP15.99■□□□□ 0.15
DUSP28-202ENST00000405954 PIK3R5Q8WYR1 880 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 FSD1Q9BTV5 496 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 MRFAP1Q9Y605 127 aa15.99■□□□□ 0.15
DUSP28-202ENST00000405954 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
DUSP28-202ENST00000405954 PTPRMP28827 1452 aa15.98■□□□□ 0.15
DUSP28-202ENST00000405954 CCT2P78371 535 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms