RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 CHD2O14647 1828 aaKnown RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 CCDC66A2RUB6 948 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 M0R2C6 588 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 CAPN2P17655 700 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 RXRAP19793 462 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 ZAP70P43403 619 aa17.5■□□□□ 0.39
ATG4B-206ENST00000405546 MORC2Q9Y6X9 1032 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-206ENST00000405546 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
ATG4B-206ENST00000405546 USPL1Q5W0Q7 1092 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 MAST3O60307 1309 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 CASP7P55210 303 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 ZNF397Q8NF99 534 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-206ENST00000405546 GJB4Q9NTQ9 266 aa17.49■□□□□ 0.39
ATG4B-206ENST00000405546 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 TRDNQ13061 729 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 NSUN7Q8NE18 718 aaKnown RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 USP28Q96RU2 1077 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 CCDC69A6NI79 296 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 HNRNPH2P55795 449 aaKnown RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 SCARF1Q14162 830 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
ATG4B-206ENST00000405546 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
ATG4B-206ENST00000405546 GOLGA8BA8MQT2 603 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 STK38Q15208 465 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
ATG4B-206ENST00000405546 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 ZNF446Q9NWS9 450 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
ATG4B-206ENST00000405546 KDM3BQ7LBC6 1761 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 ZNF213O14771 459 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 RESTQ13127 1097 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 PAXBP1Q9Y5B6 917 aa17.47■□□□□ 0.39
ATG4B-206ENST00000405546 ISM2Q6H9L7 571 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 SYT10Q6XYQ8 523 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 BRINP3Q76B58 766 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 ZNF396Q96N95 335 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-206ENST00000405546 CLSTN2Q9H4D0 955 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 PRC1O43663 620 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 PFKFB2O60825 505 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 STARD3NLO95772 234 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
ATG4B-206ENST00000405546 GYS2P54840 703 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 TCIRG1Q13488 830 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 LRRC8AQ8IWT6 810 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 ERVV-2B6SEH9 535 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 FGAP02671 866 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 SYNE3Q6ZMZ3 975 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 NFXL1Q6ZNB6 911 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
ATG4B-206ENST00000405546 OVOS2A0A0G2JMS6 1433 aa17.46■□□□□ 0.38
ATG4B-206ENST00000405546 A0A1B0GVL5 298 aa17.45■□□□□ 0.38
ATG4B-206ENST00000405546 BIN1O00499 593 aa17.45■□□□□ 0.38
ATG4B-206ENST00000405546 DSCC1Q9BVC3 393 aa17.45■□□□□ 0.38
ATG4B-206ENST00000405546 PUS7LQ9H0K6 701 aaKnown RBP17.45■□□□□ 0.38
ATG4B-206ENST00000405546 ORC3Q9UBD5 711 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-206ENST00000405546 SEC31AO94979 1220 aaKnown RBP17.45■□□□□ 0.38
ATG4B-206ENST00000405546 ELP1O95163 1332 aa17.45■□□□□ 0.38
ATG4B-206ENST00000405546 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
ATG4B-206ENST00000405546 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
ATG4B-206ENST00000405546 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
ATG4B-206ENST00000405546 SLAIN2Q9P270 581 aa17.44■□□□□ 0.38
ATG4B-206ENST00000405546 RGPD5Q99666 1765 aa17.44■□□□□ 0.38
ATG4B-206ENST00000405546 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
ATG4B-206ENST00000405546 ITGA6P23229 1130 aa17.44■□□□□ 0.38
ATG4B-206ENST00000405546 LMO7Q8WWI1 1683 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 SNAP23O00161 211 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 HLFQ16534 295 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 HOMER1Q86YM7 354 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 IPO4Q8TEX9 1081 aaKnown RBP17.43■□□□□ 0.38
ATG4B-206ENST00000405546 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 GPAA1O43292 621 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 TNNT3P45378 269 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-206ENST00000405546 GREM2Q9H772 168 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
ATG4B-206ENST00000405546 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
ATG4B-206ENST00000405546 BTG4Q9NY30 223 aa17.42■□□□□ 0.38
ATG4B-206ENST00000405546 SLIT3O75094 1523 aa17.42■□□□□ 0.38
ATG4B-206ENST00000405546 MARCKSP29966 332 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-206ENST00000405546 MICU3Q86XE3 530 aa17.42■□□□□ 0.38
ATG4B-206ENST00000405546 PIGBQ92521 554 aa17.42■□□□□ 0.38
ATG4B-206ENST00000405546 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■□□□ 13.4
ATG4B-206ENST00000405546 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms