RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 TERF2IPQ9NYB0 399 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 PGBD1Q96JS3 809 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 RAI14Q9P0K7 980 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 VPS18Q9P253 973 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 CFAP45Q9UL16 551 aa11.3□□□□□ -0.6
TNFSF11-204ENST00000405262 ERLIN1O75477 346 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 TUBBP07437 444 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 EVA1CP58658 441 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 MRFAP1Q9Y605 127 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 COL5A2P05997 1499 aaPredicted RBP11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 KRT24Q2M2I5 525 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 EGFL6Q8IUX8 553 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 PHACTR3Q96KR7 559 aa11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
TNFSF11-204ENST00000405262 KIF3CO14782 793 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 C21orf2O43822 256 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 ME3Q16798 604 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 LRRC31Q6UY01 552 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 RUFY2Q8WXA3 655 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 IL25Q9H293 177 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 MON2Q7Z3U7 1717 aa11.28□□□□□ -0.6
TNFSF11-204ENST00000405262 COL18A1P39060 1754 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 ATP8B2P98198 1209 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 TUBB2AQ13885 445 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 E2F4Q16254 413 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 TSHZ3Q63HK5 1081 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 CNTROBQ8N137 903 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 DDX11Q96FC9 970 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 TUBB2BQ9BVA1 445 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 GBP3Q9H0R5 595 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 ADCY9O60503 1353 aa11.27□□□□□ -0.6
TNFSF11-204ENST00000405262 RGPD1P0DJD0 1748 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 TNS1Q9HBL0 1735 aaKnown RBP11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 PPP1R12AO14974 1030 aaPredicted RBP11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 BEND6Q5SZJ8 279 aaPredicted RBP11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 CCDC30Q5VVM6 783 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 TMC6Q7Z403 805 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
TNFSF11-204ENST00000405262 CCDC189A1A4V9 331 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 RAB11FIP3O75154 756 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 KINO60870 393 aaKnown RBP11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 ERLIN2O94905 339 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 PSMA5P28066 241 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 FOXR1Q6PIV2 292 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 MSANTD4Q8NCY6 345 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
TNFSF11-204ENST00000405262 NFAT5O94916 1531 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 MYO1BO43795 1136 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 ZKSCAN1P17029 563 aaPredicted RBP11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 SETQ01105 290 aaPredicted RBP11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 RESTQ13127 1097 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 XPO4Q9C0E2 1151 aaKnown RBP11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 L1RE1Q9UN81 338 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 AXIN2Q9Y2T1 843 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 RGPD5Q99666 1765 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 CRB1P82279 1406 aa11.25□□□□□ -0.61
TNFSF11-204ENST00000405262 ARHGAP6O43182 974 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 CBFA2T2O43439 604 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 BAG6P46379 1132 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 FAM160A1Q05DH4 1040 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 FAM173BQ6P4H8 233 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 MICALL1Q8N3F8 863 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 FAN1Q9Y2M0 1017 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 CHL1O00533 1208 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 FANCGO15287 622 aa11.24□□□□□ -0.61
TNFSF11-204ENST00000405262 MNAT1P51948 309 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms