RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 EP400Q96L91 3159 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 CCDC129Q6ZRS4 1044 aa23.24■■□□□ 1.31
CCDC47-202ENST00000403162 DDX11Q96FC9 970 aa23.24■■□□□ 1.31
CCDC47-202ENST00000403162 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
CCDC47-202ENST00000403162 ATL3Q6DD88 541 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 NSUN7Q8NE18 718 aaKnown RBP23.23■■□□□ 1.31
CCDC47-202ENST00000403162 SEC62Q99442 399 aaKnown RBP23.23■■□□□ 1.31
CCDC47-202ENST00000403162 DNAJC2Q99543 621 aaKnown RBP23.23■■□□□ 1.31
CCDC47-202ENST00000403162 ARFGEF2Q9Y6D5 1785 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 DMTNQ08495 405 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 STX1AQ16623 288 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 ATP2B3Q16720 1220 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 CACTINQ8WUQ7 758 aaKnown RBP23.23■■□□□ 1.31
CCDC47-202ENST00000403162 MRFAP1L1Q96HT8 127 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 ZBTB1Q9Y2K1 713 aa23.23■■□□□ 1.31
CCDC47-202ENST00000403162 ZSCAN20P17040 1043 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-202ENST00000403162 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
CCDC47-202ENST00000403162 STOX1Q6ZVD7 989 aa23.22■■□□□ 1.31
CCDC47-202ENST00000403162 TICAM2Q86XR7 235 aa23.22■■□□□ 1.31
CCDC47-202ENST00000403162 KBTBD3Q8NAB2 608 aa23.22■■□□□ 1.31
CCDC47-202ENST00000403162 C16orf45Q96MC5 204 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-202ENST00000403162 AGXT2Q9BYV1 514 aa23.22■■□□□ 1.31
CCDC47-202ENST00000403162 CCNL1Q9UK58 526 aaPredicted RBP23.22■■□□□ 1.31
CCDC47-202ENST00000403162 PAXBP1Q9Y5B6 917 aa23.22■■□□□ 1.31
CCDC47-202ENST00000403162 GOLGA6L19H0YKK7 550 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 DHX32Q7L7V1 743 aaKnown RBP23.21■■□□□ 1.31
CCDC47-202ENST00000403162 CCDC87Q9NVE4 849 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 NDUFB9Q9Y6M9 179 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 NEMFO60524 1076 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 TNNT1P13805 278 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 CCDC144BQ3MJ40 725 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 CCDC144CPQ8IYA2 1237 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 PRDM10Q9NQV6 1147 aa23.21■■□□□ 1.31
CCDC47-202ENST00000403162 CHGBP05060 677 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 FGD1P98174 961 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
CCDC47-202ENST00000403162 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.3
CCDC47-202ENST00000403162 LINC00116Q8NCU8 138 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
CCDC47-202ENST00000403162 CBX1P83916 185 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 NCBP1Q09161 790 aaKnown RBP23.2■■□□□ 1.3
CCDC47-202ENST00000403162 C11orf57Q6ZUT1 292 aaPredicted RBP23.2■■□□□ 1.3
CCDC47-202ENST00000403162 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 DSCC1Q9BVC3 393 aa23.2■■□□□ 1.3
CCDC47-202ENST00000403162 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
CCDC47-202ENST00000403162 CTDNEP1O95476 244 aa23.19■■□□□ 1.3
CCDC47-202ENST00000403162 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
CCDC47-202ENST00000403162 LRRC2Q9BYS8 371 aa23.19■■□□□ 1.3
CCDC47-202ENST00000403162 HELLSQ9NRZ9 838 aa23.19■■□□□ 1.3
CCDC47-202ENST00000403162 PTPDC1A2A3K4 754 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 EXOSC10Q01780 885 aaKnown RBP23.18■■□□□ 1.3
CCDC47-202ENST00000403162 SNW1Q13573 536 aaKnown RBP23.18■■□□□ 1.3
CCDC47-202ENST00000403162 LRRC8AQ8IWT6 810 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 GOLPH3LQ9H4A5 285 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 SALL1Q9NSC2 1324 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 CCDC73Q6ZRK6 1079 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 PLBD2Q8NHP8 589 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 ZNF396Q96N95 335 aaPredicted RBP23.18■■□□□ 1.3
CCDC47-202ENST00000403162 LY75O60449 1722 aa23.18■■□□□ 1.3
CCDC47-202ENST00000403162 CASP7P55210 303 aa23.17■■□□□ 1.3
CCDC47-202ENST00000403162 ENGASEQ8NFI3 743 aa23.17■■□□□ 1.3
CCDC47-202ENST00000403162 IL6STP40189 918 aaPredicted RBP23.17■■□□□ 1.3
CCDC47-202ENST00000403162 CEBPZQ03701 1054 aaKnown RBP23.17■■□□□ 1.3
CCDC47-202ENST00000403162 TPD52L1Q16890 204 aaPredicted RBP23.17■■□□□ 1.3
CCDC47-202ENST00000403162 FAM160A1Q05DH4 1040 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 APOBRQ0VD83 1088 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 USP28Q96RU2 1077 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 FEZ1Q99689 392 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 ZBTB3Q9H5J0 574 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 COL5A3P25940 1745 aaPredicted RBP23.16■■□□□ 1.3
CCDC47-202ENST00000403162 A0A087WZG4 1122 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 KINO60870 393 aaKnown RBP23.16■■□□□ 1.3
CCDC47-202ENST00000403162 KIF6Q6ZMV9 814 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 GTPBP4Q9BZE4 634 aaKnown RBP23.16■■□□□ 1.3
CCDC47-202ENST00000403162 ANO10Q9NW15 660 aa23.16■■□□□ 1.3
CCDC47-202ENST00000403162 APBA3O96018 575 aa23.15■■□□□ 1.3
CCDC47-202ENST00000403162 CCDC112Q8NEF3 446 aa23.15■■□□□ 1.3
CCDC47-202ENST00000403162 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
CCDC47-202ENST00000403162 FTOQ9C0B1 505 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC47-202ENST00000403162 ZMYM1Q5SVZ6 1142 aa23.14■■□□□ 1.3
CCDC47-202ENST00000403162 DHX40Q8IX18 779 aaKnown RBP23.14■■□□□ 1.3
CCDC47-202ENST00000403162 ZNF274Q96GC6 653 aaPredicted RBP23.14■■□□□ 1.3
CCDC47-202ENST00000403162 GPR108Q9NPR9 543 aa23.14■■□□□ 1.3
CCDC47-202ENST00000403162 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.3
CCDC47-202ENST00000403162 U2AF2P26368 475 aaKnown RBP eCLIP23.14■■□□□ 1.295e-7■■■■□ 21
CCDC47-202ENST00000403162 SPEF2Q9C093 1822 aa23.14■■□□□ 1.29
CCDC47-202ENST00000403162 CNTNAP4Q9C0A0 1308 aa23.13■■□□□ 1.29
CCDC47-202ENST00000403162 BECN2A8MW95 431 aa23.13■■□□□ 1.29
CCDC47-202ENST00000403162 EIF5P55010 431 aaKnown RBP23.13■■□□□ 1.29
CCDC47-202ENST00000403162 MYH14Q7Z406 1995 aaKnown RBP23.13■■□□□ 1.29
CCDC47-202ENST00000403162 CEP135Q66GS9 1140 aa23.13■■□□□ 1.29
CCDC47-202ENST00000403162 LRRC4BQ9NT99 713 aa23.13■■□□□ 1.29
CCDC47-202ENST00000403162 RREB1Q92766 1687 aa23.12■■□□□ 1.29
CCDC47-202ENST00000403162 E7EWF7 191 aa23.12■■□□□ 1.29
CCDC47-202ENST00000403162 LMBR1LQ6UX01 489 aa23.12■■□□□ 1.29
CCDC47-202ENST00000403162 FBXL16Q8N461 479 aa23.12■■□□□ 1.29
CCDC47-202ENST00000403162 ATP5J2-PTCD1G3V325 749 aa23.11■■□□□ 1.29
CCDC47-202ENST00000403162 GOLIM4O00461 696 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms