RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 DDX19AQ9NUU7 478 aaKnown RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 MCAMP43121 646 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 HSP90AA4PQ58FG1 418 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 PIBF1Q8WXW3 757 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 B4E1Z4 1266 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 MCM5P33992 734 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 TRDNQ13061 729 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 DSCC1Q9BVC3 393 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 OVOS2A0A0G2JMS6 1433 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 GOLGA6L6A8MZA4 724 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
SCFD2-202ENST00000401642 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
SCFD2-202ENST00000401642 TRMT1Q9NXH9 659 aaKnown RBP12.97□□□□□ -0.33
SCFD2-202ENST00000401642 FDPSP14324 419 aaKnown RBP12.96□□□□□ -0.33
SCFD2-202ENST00000401642 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
SCFD2-202ENST00000401642 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.33
SCFD2-202ENST00000401642 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
SCFD2-202ENST00000401642 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
SCFD2-202ENST00000401642 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
SCFD2-202ENST00000401642 MIGA1Q8NAN2 632 aa12.96□□□□□ -0.33
SCFD2-202ENST00000401642 PIH1D3Q9NQM4 214 aaKnown RBP12.96□□□□□ -0.33
SCFD2-202ENST00000401642 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
SCFD2-202ENST00000401642 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 CTDSPL2Q05D32 466 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 AOPEPQ8N6M6 819 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 ZSCAN16Q9H4T2 348 aaPredicted RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 SEC31BQ9NQW1 1179 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 SYNE3Q6ZMZ3 975 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 TTLL11Q8NHH1 800 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
SCFD2-202ENST00000401642 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 CAMTA1Q9Y6Y1 1673 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 ELP1O95163 1332 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
SCFD2-202ENST00000401642 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 FOXP2O15409 715 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 NDUFA8P51970 172 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 NLRP10Q86W26 655 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
SCFD2-202ENST00000401642 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
SCFD2-202ENST00000401642 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
SCFD2-202ENST00000401642 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
SCFD2-202ENST00000401642 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
SCFD2-202ENST00000401642 NPHP1O15259 732 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 PRKAB2O43741 272 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 ZNF75DP51815 510 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 APPBP2Q92624 585 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 ANTXR2P58335 489 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
SCFD2-202ENST00000401642 MAGEB6Q8N7X4 407 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 SMC2O95347 1197 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 TPD52L1Q16890 204 aaPredicted RBP12.93□□□□□ -0.34
SCFD2-202ENST00000401642 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 CYB5R4Q7L1T6 521 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 NUP133Q8WUM0 1156 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCFD2-202ENST00000401642 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
SCFD2-202ENST00000401642 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 CTSWP56202 376 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 KIAA1524Q8TCG1 905 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 MINDY4BA8MYZ0 360 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
SCFD2-202ENST00000401642 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 V9GYY5 206 aaPredicted RBP12.92□□□□□ -0.34
SCFD2-202ENST00000401642 VGLL3A8MV65 326 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 MBD4O95243 580 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCFD2-202ENST00000401642 BCAMP50895 628 aa12.91□□□□□ -0.34
SCFD2-202ENST00000401642 NAA30Q147X3 362 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms