RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 RAD50Q92878 1312 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 SBF1O95248 1867 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 CHMLP26374 656 aa8.31□□□□□ -1.08
USP16-203ENST00000399975 C21orf2O43822 256 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 CYP2E1P05181 493 aaPredicted RBP8.3□□□□□ -1.08
USP16-203ENST00000399975 ZAP70P43403 619 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 ZSCAN25Q6NSZ9 544 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 ZGPATQ8N5A5 531 aaKnown RBP8.3□□□□□ -1.08
USP16-203ENST00000399975 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 WDR66Q8TBY9 1149 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
USP16-203ENST00000399975 WASHC4Q2M389 1173 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 TBC1D9Q6ZT07 1266 aa8.3□□□□□ -1.08
USP16-203ENST00000399975 ZC3H12CQ9C0D7 883 aaKnown RBP8.3□□□□□ -1.08
USP16-203ENST00000399975 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 C6orf229H3BNL8 230 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 TBC1D22AQ8WUA7 517 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 SCN9AQ15858 1988 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 COL4A5P29400 1685 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 GOLIM4O00461 696 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 UBE3CQ15386 1083 aa8.29□□□□□ -1.08
USP16-203ENST00000399975 SPTY2D1Q68D10 685 aaPredicted RBP8.29□□□□□ -1.08
USP16-203ENST00000399975 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.29□□□□□ -1.088e-8■□□□□ 11.1
USP16-203ENST00000399975 PIH1D3Q9NQM4 214 aaKnown RBP8.29□□□□□ -1.08
USP16-203ENST00000399975 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
USP16-203ENST00000399975 MMP14P50281 582 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 RUFY2Q8WXA3 655 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 RILPL2Q969X0 211 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 DNAJC2Q99543 621 aaKnown RBP8.28□□□□□ -1.08
USP16-203ENST00000399975 MRIQ9BWK5 157 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 FOCADQ5VW36 1801 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 ADD2P35612 726 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 ESYT1Q9BSJ8 1104 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 FSD1Q9BTV5 496 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 NFKBIEO00221 500 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 IARSP41252 1262 aaKnown RBP8.28□□□□□ -1.08
USP16-203ENST00000399975 STRIP1Q5VSL9 837 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 IL17RAQ96F46 866 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
USP16-203ENST00000399975 TIAM2Q8IVF5 1701 aa8.27□□□□□ -1.08
USP16-203ENST00000399975 SGSM2O43147 1006 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 MAP4K4O95819 1239 aaPredicted RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 MAP3K12Q12852 859 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 GPR101Q96P66 508 aaPredicted RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 RPAP1Q9BWH6 1393 aaPredicted RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 LAMA4Q16363 1823 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 ECE2O60344 883 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 PI16Q6UXB8 463 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 APPBP2Q92624 585 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 EDC3Q96F86 508 aaKnown RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 PPP1R1BQ9UD71 204 aaPredicted RBP8.27□□□□□ -1.09
USP16-203ENST00000399975 ECM29Q5VYK3 1845 aa8.27□□□□□ -1.09
USP16-203ENST00000399975 MYH2Q9UKX2 1941 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 AOC3Q16853 763 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 CERS3Q8IU89 383 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 BCS1LQ9Y276 419 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 MYO3BQ8WXR4 1341 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 PPIP5K2O43314 1243 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 PDE6AP16499 860 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 MFAP1P55081 439 aaKnown RBP8.26□□□□□ -1.09
USP16-203ENST00000399975 GSTO1P78417 241 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 HDLBPQ00341 1268 aaKnown RBP8.26□□□□□ -1.09
USP16-203ENST00000399975 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
USP16-203ENST00000399975 MCMDC2Q4G0Z9 681 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 ERICH6Q7L0X2 663 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 MAST3O60307 1309 aa8.26□□□□□ -1.09
USP16-203ENST00000399975 DDX60LQ5H9U9 1706 aaKnown RBP8.26□□□□□ -1.09
USP16-203ENST00000399975 USP17L3A6NCW0 530 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 USP17L4A6NCW7 530 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 REC8O95072 547 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 VIL1P09327 827 aaKnown RBP8.25□□□□□ -1.09
USP16-203ENST00000399975 DACT2Q5SW24 774 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 USP17L1Q7RTZ2 530 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 NSUN4Q96CB9 384 aaKnown RBP8.25□□□□□ -1.09
USP16-203ENST00000399975 ZNRF3Q9ULT6 936 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 NDUFB9Q9Y6M9 179 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 ZMYM6O95789 1325 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 YDJCA8MPS7 323 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 IL27Q8NEV9 243 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 KCNB2Q92953 911 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 ZNF219Q9P2Y4 722 aaPredicted RBP8.25□□□□□ -1.09
USP16-203ENST00000399975 GAKO14976 1311 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 A0A0D9SFI3 127 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 FZD9O00144 591 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 PPP4CP60510 307 aa8.25□□□□□ -1.09
USP16-203ENST00000399975 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms