RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 GNAI3P08754 354 aa9.62□□□□□ -0.87
CACNA1C-220ENST00000399655 SH3GL2Q99962 352 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 PSMA3P25788 255 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 TUBB2AQ13885 445 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 TTC16Q8NEE8 873 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 TUBB2BQ9BVA1 445 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 APOA1P02647 267 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 GNG11P61952 73 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 YY1AP1Q9H869 796 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 TRAF1Q13077 416 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 TAF12Q16514 161 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 VSIG1Q86XK7 387 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 STX19Q8N4C7 294 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 ANKRD12Q6UB98 2062 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 KIF11P52732 1056 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 CNGA2Q16280 664 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 PPP4R4Q6NUP7 873 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 BIRC5O15392 142 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 HCLS1P14317 486 aaPredicted RBP9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 LRGUKQ96M69 825 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 LNPKQ9C0E8 428 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 UTP11Q9Y3A2 253 aaKnown RBP9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 CD2APQ9Y5K6 639 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 C16orf87Q6PH81 154 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 SEL1L2Q5TEA6 688 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 SERPINB10P48595 397 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
CACNA1C-220ENST00000399655 NDUFAB1O14561 156 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PYGMP11217 842 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 XRCC6P12956 609 aaKnown RBP eCLIP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 NBPF3Q9H094 633 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 TBCAO75347 108 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 USP5P45974 858 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 MRFAP1L1Q96HT8 127 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 TRAF5O00463 557 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 SPAG1Q07617 926 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 LETM2Q2VYF4 491 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 THOC7Q6I9Y2 204 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 EXOC5O00471 708 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 AP1S2P56377 157 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 ZNF449Q6P9G9 518 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 ZNF830Q96NB3 372 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 SLC12A2P55011 1212 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PIP4K2CQ8TBX8 421 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PLCB3Q01970 1234 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 VPS18Q9P253 973 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 B4DLN1 442 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 OCM2P0CE71 109 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 OCMP0CE72 109 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 MRPL12P52815 198 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 GSDMAQ96QA5 445 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 DDX21Q9NR30 783 aaKnown RBP eCLIP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PRR23D1E9PI22 279 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PRR23D2P0DMB1 279 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 ST13P5Q8NFI4 369 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 TCERG1LQ5VWI1 586 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 DNAJC17Q9NVM6 304 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 FRMD4BQ9Y2L6 1034 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 MYO1BO43795 1136 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 EEF2P13639 858 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 FAM204AQ9H8W3 233 aa9.6□□□□□ -0.87
CACNA1C-220ENST00000399655 PLCD3Q8N3E9 789 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 HOOK2Q96ED9 719 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 IFNA8P32881 189 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 P3H4Q92791 437 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 GABPAQ06546 454 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 HAUS1Q96CS2 278 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 GSNP06396 782 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 STX1BP61266 288 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 OCA2Q04671 838 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 STX3Q13277 289 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 DENND2CQ68D51 928 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 GNAI1P63096 354 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 CFAP70Q5T0N1 1121 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 KLHL31Q9H511 634 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 EFCAB8A8MWE9 144 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 NSMCE1Q8WV22 266 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 ABTB1Q969K4 478 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 CREB3O43889 395 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 CA8P35219 290 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 MED4Q9NPJ6 270 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 ZKSCAN8Q15776 578 aaPredicted RBP9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
CACNA1C-220ENST00000399655 KRT87PA6NCN2 255 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 KRT75O95678 551 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 RAB14P61106 215 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 TBCCQ15814 346 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 LRRC8BQ6P9F7 803 aa9.58□□□□□ -0.88
CACNA1C-220ENST00000399655 NBNO60934 754 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms