RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-207ENST00000399338 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
ITSN1-207ENST00000399338 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 PDCD2Q16342 344 aaPredicted RBP12.66□□□□□ -0.38
ITSN1-207ENST00000399338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■■□ 25.1
ITSN1-207ENST00000399338 ATP6V0A4Q9HBG4 840 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
ITSN1-207ENST00000399338 PLCH2O75038 1416 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■■□□ 17.2
ITSN1-207ENST00000399338 ARHGAP6O43182 974 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 FAM163BP0C2L3 166 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 RAB27AP51159 221 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 ACTN3Q08043 901 aaPredicted RBP12.65□□□□□ -0.38
ITSN1-207ENST00000399338 PSMD2Q13200 908 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 MEFVO15553 781 aaPredicted RBP12.65□□□□□ -0.38
ITSN1-207ENST00000399338 TUBBP07437 444 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 KIF4BQ2VIQ3 1234 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 EHD4Q9H223 541 aa12.65□□□□□ -0.38
ITSN1-207ENST00000399338 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
ITSN1-207ENST00000399338 PRPHP41219 470 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 PUF60Q9UHX1 559 aaKnown RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 SNX1Q13596 522 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 KIRREL3Q8IZU9 778 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 ZBTB10Q96DT7 871 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 CDC23Q9UJX2 597 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 NEFHP12036 1026 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 PPFIA1Q13136 1202 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 PLCB4Q15147 1175 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 B4GALNT4Q76KP1 1039 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-207ENST00000399338 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 HPCAL4Q9UM19 191 aa12.64□□□□□ -0.39
ITSN1-207ENST00000399338 HMMRO75330 724 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 WDR93Q6P2C0 686 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 TRIM74Q86UV6 250 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 TRIM73Q86UV7 250 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 FAM76AQ8TAV0 307 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 MEIS3Q99687 375 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 HOMER3Q9NSC5 361 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 ARHGAP25P42331 645 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 NAA25Q14CX7 972 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 NCAPHQ15003 741 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 SAMM50Q9Y512 469 aa12.63□□□□□ -0.39
ITSN1-207ENST00000399338 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
ITSN1-207ENST00000399338 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
ITSN1-207ENST00000399338 OR8K1Q8NGG5 319 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.39
ITSN1-207ENST00000399338 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 KIAA0754O94854 1291 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 ZNF202O95125 648 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 RHOXF2BP0C7M4 288 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 RHOXF2Q9BQY4 288 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 PAGR1Q9BTK6 254 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 CAPS2Q9BXY5 557 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 ABCC3O15438 1527 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 EZRP15311 586 aaKnown RBP12.62□□□□□ -0.39
ITSN1-207ENST00000399338 FANCCQ00597 558 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 C3orf20Q8ND61 904 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
ITSN1-207ENST00000399338 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 TM6SF1Q9BZW5 370 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 TPCN1Q9ULQ1 816 aa12.62□□□□□ -0.39
ITSN1-207ENST00000399338 GOLGA8FQ08AF8 430 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 GOLGA8DPQ0D2H9 430 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 RESTQ13127 1097 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 SNCBQ16143 134 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 CEP57Q86XR8 500 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
ITSN1-207ENST00000399338 SLC40A1Q9NP59 571 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 PDHBP11177 359 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
ITSN1-207ENST00000399338 DPCR1Q3MIW9 517 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.61□□□□□ -0.39
ITSN1-207ENST00000399338 UGGT1Q9NYU2 1555 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 AOX1Q06278 1338 aa12.61□□□□□ -0.39
ITSN1-207ENST00000399338 TRPM2O94759 1503 aa12.6□□□□□ -0.39
ITSN1-207ENST00000399338 AGPSO00116 658 aa12.6□□□□□ -0.39
ITSN1-207ENST00000399338 KCNB1Q14721 858 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms