RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OGFOD1Q8N543 542 aa17.51■□□□□ 0.39
HLA-DQB1-202ENST00000399079 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
HLA-DQB1-202ENST00000399079 LPIN2Q92539 896 aa17.51■□□□□ 0.39
HLA-DQB1-202ENST00000399079 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-202ENST00000399079 F8W031 263 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB1-202ENST00000399079 SLC5A1P13866 664 aa17.5■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
HLA-DQB1-202ENST00000399079 SCARF1Q14162 830 aa17.5■□□□□ 0.39
HLA-DQB1-202ENST00000399079 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB1-202ENST00000399079 TFCP2Q12800 502 aa17.49■□□□□ 0.39
HLA-DQB1-202ENST00000399079 POLA2Q14181 598 aa17.49■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ATP2B3Q16720 1220 aa17.49■□□□□ 0.39
HLA-DQB1-202ENST00000399079 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
HLA-DQB1-202ENST00000399079 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 USP48Q86UV5 1035 aa17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 CREBZFQ9NS37 354 aa17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 GGA3Q9NZ52 723 aa17.48■□□□□ 0.39
HLA-DQB1-202ENST00000399079 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 TIMM10P62072 90 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 MFSD14BQ5SR56 506 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 SCAF8Q9UPN6 1271 aaKnown RBP17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ADM5C9JUS6 153 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 WNT10BO00744 389 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ADORA1P30542 326 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 G3BP1Q13283 466 aaKnown RBP eCLIP17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 CST9Q5W186 159 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 KRT26Q7Z3Y9 468 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 PCDHAC2Q9Y5I4 1007 aa17.47■□□□□ 0.39
HLA-DQB1-202ENST00000399079 FKBP1AP62942 108 aaKnown RBP17.46■□□□□ 0.39
HLA-DQB1-202ENST00000399079 GRIK5Q16478 980 aa17.46■□□□□ 0.39
HLA-DQB1-202ENST00000399079 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
HLA-DQB1-202ENST00000399079 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
HLA-DQB1-202ENST00000399079 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
HLA-DQB1-202ENST00000399079 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
HLA-DQB1-202ENST00000399079 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-202ENST00000399079 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
HLA-DQB1-202ENST00000399079 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
HLA-DQB1-202ENST00000399079 ZNF408Q9H9D4 720 aa17.45■□□□□ 0.38
HLA-DQB1-202ENST00000399079 POLR2AP24928 1970 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-202ENST00000399079 CELF2O95319 508 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-202ENST00000399079 PHKA1P46020 1223 aa17.44■□□□□ 0.38
HLA-DQB1-202ENST00000399079 MKRN1Q9UHC7 482 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-202ENST00000399079 SULF1Q8IWU6 871 aa17.43■□□□□ 0.38
HLA-DQB1-202ENST00000399079 ZBED3Q96IU2 234 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-202ENST00000399079 NEUROD6Q96NK8 337 aa17.43■□□□□ 0.38
HLA-DQB1-202ENST00000399079 TTF2Q9UNY4 1162 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB1-202ENST00000399079 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
HLA-DQB1-202ENST00000399079 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 MMP14P50281 582 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 DLGAP5Q15398 846 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 XAGE2Q96GT9 111 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 AOX1Q06278 1338 aa17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 RBM5P52756 815 aaKnown RBP eCLIP17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-202ENST00000399079 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
HLA-DQB1-202ENST00000399079 MTMR14Q8NCE2 650 aa17.41■□□□□ 0.38
HLA-DQB1-202ENST00000399079 TBC1D22AQ8WUA7 517 aa17.41■□□□□ 0.38
HLA-DQB1-202ENST00000399079 PRMT6Q96LA8 375 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-202ENST00000399079 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-202ENST00000399079 PITPNM2Q9BZ72 1349 aa17.4■□□□□ 0.38
HLA-DQB1-202ENST00000399079 SPDYE2BA6NHP3 402 aa17.4■□□□□ 0.38
HLA-DQB1-202ENST00000399079 SPDYE6P0CI01 402 aa17.4■□□□□ 0.38
HLA-DQB1-202ENST00000399079 PRAMEF18Q5VWM3 479 aa17.4■□□□□ 0.38
HLA-DQB1-202ENST00000399079 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
HLA-DQB1-202ENST00000399079 TRPM7Q96QT4 1865 aa17.39■□□□□ 0.37
HLA-DQB1-202ENST00000399079 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-202ENST00000399079 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-202ENST00000399079 CDCA5Q96FF9 252 aa17.39■□□□□ 0.37
HLA-DQB1-202ENST00000399079 CNTNAP1P78357 1384 aa17.39■□□□□ 0.37
HLA-DQB1-202ENST00000399079 CLRN2A0PK11 232 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 WDR66Q8TBY9 1149 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 CHMP4BQ9H444 224 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 TLL2Q9Y6L7 1015 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
HLA-DQB1-202ENST00000399079 PRDX5P30044 214 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 CRKP46108 304 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 VEGFBP49765 207 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 SEMA3EO15041 775 aa17.37■□□□□ 0.37
HLA-DQB1-202ENST00000399079 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms