RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
PRAME-202ENST00000398743 A0A0G2JS52 829 aa16.27■□□□□ 0.2
PRAME-202ENST00000398743 ZNF500O60304 480 aaPredicted RBP16.27■□□□□ 0.2
PRAME-202ENST00000398743 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
PRAME-202ENST00000398743 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
PRAME-202ENST00000398743 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
PRAME-202ENST00000398743 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.2
PRAME-202ENST00000398743 LPIN2Q92539 896 aa16.27■□□□□ 0.2
PRAME-202ENST00000398743 PRC1O43663 620 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 ADAMTS2O95450 1211 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 ATP6V1AP38606 617 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 PHKA1P46020 1223 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 UBE3CQ15386 1083 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.19
PRAME-202ENST00000398743 BICD2Q8TD16 824 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 TNMDQ9H2S6 317 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 SLIT2O94813 1529 aa16.27■□□□□ 0.19
PRAME-202ENST00000398743 IDH1O75874 414 aaKnown RBP16.26■□□□□ 0.19
PRAME-202ENST00000398743 CAMK4Q16566 473 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 PIH1D3Q9NQM4 214 aaKnown RBP16.26■□□□□ 0.19
PRAME-202ENST00000398743 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 KDM4AO75164 1064 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 ADCY5O95622 1261 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 FGFR2P21802 821 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
PRAME-202ENST00000398743 FOSBP53539 338 aa16.26■□□□□ 0.19
PRAME-202ENST00000398743 WDR19Q8NEZ3 1342 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
PRAME-202ENST00000398743 ATL3Q6DD88 541 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
PRAME-202ENST00000398743 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 MYH7P12883 1935 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 AKAP11Q9UKA4 1901 aa16.25■□□□□ 0.19
PRAME-202ENST00000398743 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 SLC5A1P13866 664 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 ADD1P35611 737 aaKnown RBP16.24■□□□□ 0.19
PRAME-202ENST00000398743 SIK1P57059 783 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 MPHOSPH8Q99549 860 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 CLSTN2Q9H4D0 955 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 GPHNQ9NQX3 736 aaPredicted RBP16.24■□□□□ 0.19
PRAME-202ENST00000398743 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 KLF18A0A0U1RQI7 1052 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 GOLGA8BA8MQT2 603 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 NR1I2O75469 434 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 TYRO3Q06418 890 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 TRDNQ13061 729 aa16.24■□□□□ 0.19
PRAME-202ENST00000398743 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
PRAME-202ENST00000398743 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
PRAME-202ENST00000398743 ZNF396Q96N95 335 aaPredicted RBP16.24■□□□□ 0.19
PRAME-202ENST00000398743 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 OFD1O75665 1012 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 PDE6AP16499 860 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 ANTXR2P58335 489 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
PRAME-202ENST00000398743 MARCH10Q8NA82 808 aaPredicted RBP16.23■□□□□ 0.19
PRAME-202ENST00000398743 FAM200AQ8TCP9 573 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 PPFIA3O75145 1194 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 APPP05067 770 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 FDPSP14324 419 aaKnown RBP16.23■□□□□ 0.19
PRAME-202ENST00000398743 CEBPZQ03701 1054 aaKnown RBP16.23■□□□□ 0.19
PRAME-202ENST00000398743 CKAP2LQ8IYA6 745 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 RCOR1Q9UKL0 485 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
PRAME-202ENST00000398743 ARAP2Q8WZ64 1704 aa16.22■□□□□ 0.19
PRAME-202ENST00000398743 CCDC152Q4G0S7 254 aa16.22■□□□□ 0.19
PRAME-202ENST00000398743 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
PRAME-202ENST00000398743 AIDAQ96BJ3 306 aa16.22■□□□□ 0.19
PRAME-202ENST00000398743 WWC3Q9ULE0 1092 aa16.22■□□□□ 0.19
PRAME-202ENST00000398743 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 GUCY1B3Q02153 619 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 ITPK1Q13572 414 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 CPLX1O14810 134 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 USP28Q96RU2 1077 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
PRAME-202ENST00000398743 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRAME-202ENST00000398743 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.21■□□□□ 0.192e-9■□□□□ 9.9
PRAME-202ENST00000398743 RREB1Q92766 1687 aa16.21■□□□□ 0.18
PRAME-202ENST00000398743 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.18
PRAME-202ENST00000398743 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.18
PRAME-202ENST00000398743 RTL9Q8NET4 1388 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
PRAME-202ENST00000398743 MAP3K12Q12852 859 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 TBC1D10CQ8IV04 446 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRAME-202ENST00000398743 CICQ96RK0 1608 aaPredicted RBP16.2■□□□□ 0.18
PRAME-202ENST00000398743 NTSR2O95665 410 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 SASS6Q6UVJ0 657 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
PRAME-202ENST00000398743 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
PRAME-202ENST00000398743 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms