RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 CIAO1O76071 339 aa14.19□□□□□ -0.14
MEG3-201ENST00000398460 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
MEG3-201ENST00000398460 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
MEG3-201ENST00000398460 PDIA3P30101 505 aaKnown RBP14.19□□□□□ -0.14
MEG3-201ENST00000398460 ZAP70P43403 619 aa14.19□□□□□ -0.14
MEG3-201ENST00000398460 STK38Q15208 465 aa14.19□□□□□ -0.14
MEG3-201ENST00000398460 FSIP1Q8NA03 581 aa14.19□□□□□ -0.14
MEG3-201ENST00000398460 USP28Q96RU2 1077 aa14.19□□□□□ -0.14
MEG3-201ENST00000398460 KLF18A0A0U1RQI7 1052 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 ZNF213O14771 459 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 POLR3DP05423 398 aaPredicted RBP14.18□□□□□ -0.14
MEG3-201ENST00000398460 ZFYP08048 801 aaPredicted RBP14.18□□□□□ -0.14
MEG3-201ENST00000398460 GNL2Q13823 731 aaKnown RBP14.18□□□□□ -0.14
MEG3-201ENST00000398460 ARID5BQ14865 1188 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 FEZ1Q99689 392 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.18□□□□□ -0.14
MEG3-201ENST00000398460 GPHNQ9NQX3 736 aaPredicted RBP14.18□□□□□ -0.14
MEG3-201ENST00000398460 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
MEG3-201ENST00000398460 OTUD7BQ6GQQ9 843 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 PI16Q6UXB8 463 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 ZBTB9Q96C00 473 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
MEG3-201ENST00000398460 CTIFO43310 598 aaKnown RBP14.17□□□□□ -0.14
MEG3-201ENST00000398460 PRC1O43663 620 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 SYNE3Q6ZMZ3 975 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 C5P01031 1676 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 CARD10Q9BWT7 1032 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 ORC3Q9UBD5 711 aaPredicted RBP14.17□□□□□ -0.14
MEG3-201ENST00000398460 CPDO75976 1380 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
MEG3-201ENST00000398460 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
MEG3-201ENST00000398460 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 FGAP02671 866 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
MEG3-201ENST00000398460 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 TEX13AQ9BXU3 409 aaPredicted RBP14.16□□□□□ -0.14
MEG3-201ENST00000398460 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
MEG3-201ENST00000398460 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 MRC1P22897 1456 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 LMTK3Q96Q04 1460 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 CTAGE5O15320 804 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 IRX5P78411 483 aaPredicted RBP14.16□□□□□ -0.14
MEG3-201ENST00000398460 SYNE4Q8N205 404 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 APPBP2Q92624 585 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 A0A087WWV3 80 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 ANKRD18BA2A2Z9 1011 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 GPAA1O43292 621 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 SCARF1Q14162 830 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 ISCA1Q9BUE6 129 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
MEG3-201ENST00000398460 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 USP27XA6NNY8 438 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 ITGA6P23229 1130 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 STX1AQ16623 288 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 SLC9C2Q5TAH2 1124 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 FILIP1Q7Z7B0 1213 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 ERCC4Q92889 916 aaPredicted RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 ZBTB38Q8NAP3 1195 aaPredicted RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 PUS7LQ9H0K6 701 aaKnown RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.14
MEG3-201ENST00000398460 RCOR1Q9UKL0 485 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
MEG3-201ENST00000398460 CAVIN2O95810 425 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 ZNF75DP51815 510 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 ZSCAN25Q6NSZ9 544 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 NFXL1Q6ZNB6 911 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 KIF18AQ8NI77 898 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CACTINQ8WUQ7 758 aaKnown RBP14.14□□□□□ -0.15
MEG3-201ENST00000398460 TOMM22Q9NS69 142 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 SIPA1L3O60292 1781 aaPredicted RBP14.14□□□□□ -0.15
MEG3-201ENST00000398460 DCCP43146 1447 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
MEG3-201ENST00000398460 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CARMIL3Q8ND23 1372 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 SMTNL1A8MU46 457 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 FAM160A1Q05DH4 1040 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 ELF2Q15723 593 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 KMT5BQ4FZB7 885 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CEP135Q66GS9 1140 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CERS3Q8IU89 383 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 CEP57L1Q8IYX8 460 aa14.14□□□□□ -0.15
MEG3-201ENST00000398460 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 TERF2Q15554 542 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
MEG3-201ENST00000398460 GREM2Q9H772 168 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 IRS4O14654 1257 aaPredicted RBP14.13□□□□□ -0.15
MEG3-201ENST00000398460 ATL3Q6DD88 541 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 TDRD7Q8NHU6 1098 aaKnown RBP14.13□□□□□ -0.15
MEG3-201ENST00000398460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.13□□□□□ -0.15
MEG3-201ENST00000398460 PIGBQ92521 554 aa14.13□□□□□ -0.15
MEG3-201ENST00000398460 NAT10Q9H0A0 1025 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms