RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 GCP02774 474 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TUBB4AP04350 444 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 AFMP43652 599 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 STX17P56962 302 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NLRP12P59046 1061 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TXLNBQ8N3L3 684 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 TAF6LQ9Y6J9 622 aa12.78□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ZBTB43O43298 467 aa12.77□□□□□ -0.36
CSGALNACT1-202ENST00000397998 PHACTR2O75167 634 aa12.77□□□□□ -0.36
CSGALNACT1-202ENST00000397998 WASF1Q92558 559 aa12.77□□□□□ -0.36
CSGALNACT1-202ENST00000397998 CLIC4Q9Y696 253 aa12.77□□□□□ -0.36
CSGALNACT1-202ENST00000397998 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.36
CSGALNACT1-202ENST00000397998 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CDC25BP30305 580 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 RAI14Q9P0K7 980 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KDRP35968 1356 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
CSGALNACT1-202ENST00000397998 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 LDHAL6AQ6ZMR3 332 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PPP1R13BQ96KQ4 1090 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ATF3P18847 181 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PPP2R3AQ06190 1150 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 SYCP1Q15431 976 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ANKLE2Q86XL3 938 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ANKRD7Q92527 254 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 NEO1Q92859 1461 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CPS1P31327 1500 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PFKFB1P16118 471 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GPTP24298 496 aa12.76□□□□□ -0.37
CSGALNACT1-202ENST00000397998 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ADCY9O60503 1353 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CCDC191Q8NCU4 936 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CCDC47Q96A33 483 aaKnown RBP12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ZNF496Q96IT1 587 aaPredicted RBP12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 MTX1Q13505 466 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PNOCQ13519 176 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 C10orf67Q8IYJ2 551 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 PHKBQ93100 1093 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TSPYL1Q9H0U9 437 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TMEM2Q9UHN6 1383 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CCDC175P0C221 793 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 HSPD1P10809 573 aaKnown RBP12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TERF2Q15554 542 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GOLPH3LQ9H4A5 285 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 MAGEC2Q9UBF1 373 aaPredicted RBP12.75□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CHGBP05060 677 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 VPS18Q9P253 973 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 SEC31AO94979 1220 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 YEATS4O95619 227 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CAPN2P17655 700 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ADKP55263 362 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TBX22Q9Y458 520 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 N4BP3O15049 544 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 TXLNAP40222 546 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 ZNF569Q5MCW4 686 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KIAA1328Q86T90 577 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CTIFO43310 598 aaKnown RBP12.73□□□□□ -0.37
CSGALNACT1-202ENST00000397998 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
CSGALNACT1-202ENST00000397998 DHX58Q96C10 678 aa12.73□□□□□ -0.37
CSGALNACT1-202ENST00000397998 CRACR2AQ9BSW2 395 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms