RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DENND2AQ9ULE3 1009 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 ZNRF3Q9ULT6 936 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 AOX1Q06278 1338 aa28.8■■■□□ 2.2
TSPAN4-203ENST00000397397 CHAF1AQ13111 956 aaPredicted RBP28.79■■■□□ 2.2
TSPAN4-203ENST00000397397 PI4K2BQ8TCG2 481 aa28.79■■■□□ 2.2
TSPAN4-203ENST00000397397 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.79■■■□□ 2.2
TSPAN4-203ENST00000397397 OSBPL3Q9H4L5 887 aa28.79■■■□□ 2.2
TSPAN4-203ENST00000397397 YDJCA8MPS7 323 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 GLRX3O76003 335 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 C9orf131Q5VYM1 1079 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 SPATA5Q8NB90 893 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 FBXW7Q969H0 707 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 SNRKQ9NRH2 765 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 HMG20BQ9P0W2 317 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 AKAP11Q9UKA4 1901 aa28.78■■■□□ 2.2
TSPAN4-203ENST00000397397 PI16Q6UXB8 463 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 KCNQ5Q9NR82 932 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 JAG2Q9Y219 1238 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 COL1A1P02452 1464 aaPredicted RBP28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 SCN9AQ15858 1988 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 ZBTB22O15209 634 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 GTF2IP78347 998 aa28.77■■■□□ 2.2
TSPAN4-203ENST00000397397 DNAJC2Q99543 621 aaKnown RBP28.76■■■□□ 2.19
TSPAN4-203ENST00000397397 HAUS7Q99871 368 aa28.76■■■□□ 2.19
TSPAN4-203ENST00000397397 NDUFB9Q9Y6M9 179 aa28.76■■■□□ 2.19
TSPAN4-203ENST00000397397 ZAP70P43403 619 aa28.75■■■□□ 2.19
TSPAN4-203ENST00000397397 TTLL5Q6EMB2 1281 aa28.75■■■□□ 2.19
TSPAN4-203ENST00000397397 TIAM2Q8IVF5 1701 aa28.75■■■□□ 2.19
TSPAN4-203ENST00000397397 ZNF526Q8TF50 670 aaPredicted RBP28.75■■■□□ 2.19
TSPAN4-203ENST00000397397 PDS5AQ29RF7 1337 aaKnown RBP28.74■■■□□ 2.19
TSPAN4-203ENST00000397397 FAM205AQ6ZU69 1335 aa28.74■■■□□ 2.19
TSPAN4-203ENST00000397397 RAD17O75943 681 aa28.74■■■□□ 2.19
TSPAN4-203ENST00000397397 PSME4Q14997 1843 aa28.74■■■□□ 2.19
TSPAN4-203ENST00000397397 USP17L3A6NCW0 530 aa28.73■■■□□ 2.19
TSPAN4-203ENST00000397397 USP17L4A6NCW7 530 aa28.73■■■□□ 2.19
TSPAN4-203ENST00000397397 FZD9O00144 591 aa28.73■■■□□ 2.19
TSPAN4-203ENST00000397397 EIF6P56537 245 aaKnown RBP28.73■■■□□ 2.19
TSPAN4-203ENST00000397397 USP17L1Q7RTZ2 530 aa28.73■■■□□ 2.19
TSPAN4-203ENST00000397397 MAP4K4O95819 1239 aaPredicted RBP28.72■■■□□ 2.19
TSPAN4-203ENST00000397397 STRIP1Q5VSL9 837 aa28.72■■■□□ 2.19
TSPAN4-203ENST00000397397 WDR66Q8TBY9 1149 aa28.72■■■□□ 2.19
TSPAN4-203ENST00000397397 CXCL9Q07325 125 aa28.71■■■□□ 2.19
TSPAN4-203ENST00000397397 TTC22Q5TAA0 569 aa28.71■■■□□ 2.19
TSPAN4-203ENST00000397397 GOLIM4O00461 696 aa28.7■■■□□ 2.19
TSPAN4-203ENST00000397397 CYP2E1P05181 493 aaPredicted RBP28.7■■■□□ 2.19
TSPAN4-203ENST00000397397 CIAPIN1Q6FI81 312 aa28.7■■■□□ 2.19
TSPAN4-203ENST00000397397 EDC3Q96F86 508 aaKnown RBP28.7■■■□□ 2.19
TSPAN4-203ENST00000397397 PAG1Q9NWQ8 432 aa28.7■■■□□ 2.19
TSPAN4-203ENST00000397397 ZNF646O15015 1829 aaPredicted RBP28.7■■■□□ 2.18
TSPAN4-203ENST00000397397 PSMD14O00487 310 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 DACT2Q5SW24 774 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 TBC1D22AQ8WUA7 517 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 TNIP1Q15025 636 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 MFSD14BQ5SR56 506 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 TBC1D9Q6ZT07 1266 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 ANTXR1Q9H6X2 564 aa28.69■■■□□ 2.18
TSPAN4-203ENST00000397397 ZNF541Q9H0D2 1346 aa28.68■■■□□ 2.18
TSPAN4-203ENST00000397397 MXD3Q9BW11 206 aa28.68■■■□□ 2.18
TSPAN4-203ENST00000397397 GPBP1L1Q9HC44 474 aaPredicted RBP28.68■■■□□ 2.18
TSPAN4-203ENST00000397397 ABCF2Q9UG63 623 aa28.68■■■□□ 2.18
TSPAN4-203ENST00000397397 SALL1Q9NSC2 1324 aa28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 TRIM6-TRIM34B2RNG4 842 aa28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 VIL1P09327 827 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 GSPT1P15170 499 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 TTF1Q15361 905 aaPredicted RBP28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 ZGPATQ8N5A5 531 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 PIH1D3Q9NQM4 214 aaKnown RBP28.67■■■□□ 2.18
TSPAN4-203ENST00000397397 FKBP1AP62942 108 aaKnown RBP28.66■■■□□ 2.18
TSPAN4-203ENST00000397397 GJA3Q9Y6H8 435 aa28.66■■■□□ 2.18
TSPAN4-203ENST00000397397 MYO5AQ9Y4I1 1855 aaKnown RBP28.65■■■□□ 2.18
TSPAN4-203ENST00000397397 RSBN1LQ6PCB5 846 aaPredicted RBP28.65■■■□□ 2.18
TSPAN4-203ENST00000397397 CERS5Q8N5B7 392 aa28.65■■■□□ 2.18
TSPAN4-203ENST00000397397 RILPL2Q969X0 211 aa28.65■■■□□ 2.18
TSPAN4-203ENST00000397397 SPTY2D1Q68D10 685 aaPredicted RBP28.64■■■□□ 2.18
TSPAN4-203ENST00000397397 CNTROBQ8N137 903 aa28.64■■■□□ 2.18
TSPAN4-203ENST00000397397 EVI5LQ96CN4 794 aa28.64■■■□□ 2.18
TSPAN4-203ENST00000397397 LRP2BPQ9P2M1 347 aa28.64■■■□□ 2.18
TSPAN4-203ENST00000397397 ZC3H4Q9UPT8 1303 aaKnown RBP28.64■■■□□ 2.17
TSPAN4-203ENST00000397397 AK9Q5TCS8 1911 aa28.64■■■□□ 2.17
TSPAN4-203ENST00000397397 ERICH6Q7L0X2 663 aa28.63■■■□□ 2.17
TSPAN4-203ENST00000397397 MYO3BQ8WXR4 1341 aa28.63■■■□□ 2.17
TSPAN4-203ENST00000397397 DOCK2Q92608 1830 aa28.62■■■□□ 2.17
TSPAN4-203ENST00000397397 LDHBP07195 334 aaKnown RBP28.62■■■□□ 2.17
TSPAN4-203ENST00000397397 GRIK5Q16478 980 aa28.62■■■□□ 2.17
TSPAN4-203ENST00000397397 RAI14Q9P0K7 980 aa28.62■■■□□ 2.17
TSPAN4-203ENST00000397397 ZBTB12Q9Y330 459 aaPredicted RBP28.62■■■□□ 2.17
TSPAN4-203ENST00000397397 IDH1O75874 414 aaKnown RBP28.61■■■□□ 2.17
TSPAN4-203ENST00000397397 SDSP20132 328 aa28.61■■■□□ 2.17
TSPAN4-203ENST00000397397 PRDX5P30044 214 aa28.61■■■□□ 2.17
TSPAN4-203ENST00000397397 KBTBD3Q8NAB2 608 aa28.61■■■□□ 2.17
TSPAN4-203ENST00000397397 FSD1Q9BTV5 496 aa28.61■■■□□ 2.17
TSPAN4-203ENST00000397397 F8W031 263 aaPredicted RBP28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 BMP2KLQ5H9B9 411 aa28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 GPC2Q8N158 579 aa28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 SUGT1Q9Y2Z0 365 aa28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 MAP3K12Q12852 859 aa28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 AGBL3Q8NEM8 1001 aa28.6■■■□□ 2.17
TSPAN4-203ENST00000397397 DPY19L2Q6NUT2 758 aa28.59■■■□□ 2.17
TSPAN4-203ENST00000397397 DZIP1Q86YF9 867 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-203ENST00000397397 KIAA0825Q8IV33 1275 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 767.6 ms