RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 PAFAH1B1P43034 410 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 ATP8B2P98198 1209 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 FAM200AQ8TCP9 573 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.1■□□□□ 0.81
FGFR1-206ENST00000397091 TMCO5BA8MYB1 307 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 CCDC102BQ68D86 513 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 HOMER2Q9NSB8 354 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
FGFR1-206ENST00000397091 RNF113AO15541 343 aaKnown RBP20.09■□□□□ 0.81
FGFR1-206ENST00000397091 ZSWIM4Q9H7M6 989 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 CCDC113Q9H0I3 377 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 ACTN2P35609 894 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 IFFO1Q0D2I5 559 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 TBC1D5Q92609 795 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 LRRC45Q96CN5 670 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 FAM89AQ96GI7 184 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 ARHGEF10LQ9HCE6 1279 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.09■□□□□ 0.81
FGFR1-206ENST00000397091 V9GYY5 206 aaPredicted RBP20.09■□□□□ 0.81
FGFR1-206ENST00000397091 TERF1P54274 439 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 GOPCQ9HD26 462 aa20.09■□□□□ 0.81
FGFR1-206ENST00000397091 ATP10AO60312 1499 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 KIF4AO95239 1232 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 KAT6BQ8WYB5 2073 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 CAPN2P17655 700 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 TFCP2Q12800 502 aa20.08■□□□□ 0.81
FGFR1-206ENST00000397091 CCDC175P0C221 793 aa20.08■□□□□ 0.8
FGFR1-206ENST00000397091 MICALL1Q8N3F8 863 aa20.08■□□□□ 0.8
FGFR1-206ENST00000397091 TMX3Q96JJ7 454 aa20.08■□□□□ 0.8
FGFR1-206ENST00000397091 BCCIPQ9P287 314 aaKnown RBP eCLIP20.08■□□□□ 0.8
FGFR1-206ENST00000397091 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.8
FGFR1-206ENST00000397091 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 SMC5Q8IY18 1101 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 SRRTQ9BXP5 876 aaKnown RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 NOP2P46087 812 aaKnown RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 APBB1IPQ7Z5R6 666 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 C10orf67Q8IYJ2 551 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 DNAI1Q9UI46 699 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 TUBB4AP04350 444 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 CALML3P27482 149 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 PRPF4BQ13523 1007 aaKnown RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 DPH6Q7L8W6 267 aa20.07■□□□□ 0.8
FGFR1-206ENST00000397091 RBM8AQ9Y5S9 174 aaKnown RBP20.07■□□□□ 0.8
FGFR1-206ENST00000397091 ITGA6P23229 1130 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 ALDH1B1P30837 517 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 ANO6Q4KMQ2 910 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 H7C1D1 291 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 FAM13AO94988 1023 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 MCM6Q14566 821 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 SMC1AQ14683 1233 aaKnown RBP20.06■□□□□ 0.8
FGFR1-206ENST00000397091 RFX1P22670 979 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 ZNF790Q6PG37 636 aa20.06■□□□□ 0.8
FGFR1-206ENST00000397091 PARP1P09874 1014 aaKnown RBP20.05■□□□□ 0.8
FGFR1-206ENST00000397091 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 MRPL50Q8N5N7 158 aaKnown RBP20.05■□□□□ 0.8
FGFR1-206ENST00000397091 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
FGFR1-206ENST00000397091 PDE8AO60658 829 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 PLBD2Q8NHP8 589 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 ABCC2Q92887 1545 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 RRAGBQ5VZM2 374 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 TAOK3Q9H2K8 898 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 DDX21Q9NR30 783 aaKnown RBP eCLIP20.05■□□□□ 0.8
FGFR1-206ENST00000397091 ASXL1Q8IXJ9 1541 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 GNA11P29992 359 aa20.05■□□□□ 0.8
FGFR1-206ENST00000397091 PPIP5K2O43314 1243 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 CCDC24Q8N4L8 307 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 AFMP43652 599 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 MRPS9P82933 396 aaKnown RBP20.04■□□□□ 0.8
FGFR1-206ENST00000397091 HDAC1Q13547 482 aaPredicted RBP20.04■□□□□ 0.8
FGFR1-206ENST00000397091 CCDC117Q8IWD4 279 aaPredicted RBP20.04■□□□□ 0.8
FGFR1-206ENST00000397091 SPAG5Q96R06 1193 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 HSPA4P34932 840 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 ASIC1P78348 528 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 NUCB1Q02818 461 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 ZYXQ15942 572 aaKnown RBP20.04■□□□□ 0.8
FGFR1-206ENST00000397091 GRIPAP1Q4V328 841 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 ARHGAP27Q6ZUM4 889 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 ZSCAN16Q9H4T2 348 aaPredicted RBP20.04■□□□□ 0.8
FGFR1-206ENST00000397091 PKD2L1Q9P0L9 805 aa20.04■□□□□ 0.8
FGFR1-206ENST00000397091 NMIQ13287 307 aaPredicted RBP20.03■□□□□ 0.8
FGFR1-206ENST00000397091 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
FGFR1-206ENST00000397091 MRVI1Q9Y6F6 885 aa20.03■□□□□ 0.8
FGFR1-206ENST00000397091 NUP160Q12769 1436 aa20.03■□□□□ 0.8
FGFR1-206ENST00000397091 Q6ZUG5 572 aa20.03■□□□□ 0.8
FGFR1-206ENST00000397091 GIGYF2Q6Y7W6 1299 aaKnown RBP20.03■□□□□ 0.8
FGFR1-206ENST00000397091 NAA15Q9BXJ9 866 aaKnown RBP20.03■□□□□ 0.8
FGFR1-206ENST00000397091 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
FGFR1-206ENST00000397091 GCOM1H8Y6P7 765 aaPredicted RBP20.02■□□□□ 0.8
FGFR1-206ENST00000397091 MYZAPP0CAP1 466 aa20.02■□□□□ 0.8
FGFR1-206ENST00000397091 GABPB1Q06547 395 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms