RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SFPQP23246 707 aaKnown RBP eCLIP27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 HOMER1Q86YM7 354 aa27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 XPO4Q9C0E2 1151 aaKnown RBP27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 ARGLU1Q9NWB6 273 aaPredicted RBP27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 DPCR1Q3MIW9 517 aa27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 ZNF594Q96JF6 807 aaPredicted RBP27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 HAUS7Q99871 368 aa27.85■■■□□ 2.05
CSNK1E-203ENST00000396832 PLCD3Q8N3E9 789 aa27.84■■■□□ 2.05
CSNK1E-203ENST00000396832 ORC3Q9UBD5 711 aaPredicted RBP27.84■■■□□ 2.05
CSNK1E-203ENST00000396832 PCDHA7Q9UN72 937 aa27.84■■■□□ 2.05
CSNK1E-203ENST00000396832 IFNKQ9P0W0 207 aa27.84■■■□□ 2.05
CSNK1E-203ENST00000396832 NDUFA8P51970 172 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 NEK11Q8NG66 645 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 LAMA4Q16363 1823 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 E7EWF7 191 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 RAD51AP2Q09MP3 1159 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 KBTBD3Q8NAB2 608 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 TRIM34Q9BYJ4 488 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 TSPYL1Q9H0U9 437 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 C5P01031 1676 aa27.83■■■□□ 2.05
CSNK1E-203ENST00000396832 TPM4P67936 248 aa27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 PAG1Q9NWQ8 432 aa27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 DNAI1Q9UI46 699 aa27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 CLIC4Q9Y696 253 aa27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 FEZ2Q9UHY8 353 aaPredicted RBP27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 TUBB4AP04350 444 aa27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 SF3A1Q15459 793 aaKnown RBP27.82■■■□□ 2.04
CSNK1E-203ENST00000396832 ETF1P62495 437 aaKnown RBP27.81■■■□□ 2.04
CSNK1E-203ENST00000396832 CCDC85AQ96PX6 553 aaPredicted RBP27.81■■■□□ 2.04
CSNK1E-203ENST00000396832 SLC52A2Q9HAB3 445 aa27.81■■■□□ 2.04
CSNK1E-203ENST00000396832 RAPGEF4Q8WZA2 1011 aa27.81■■■□□ 2.04
CSNK1E-203ENST00000396832 HSPD1P10809 573 aaKnown RBP27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 PDIA3P30101 505 aaKnown RBP27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 KCNJ6P48051 423 aa27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 NAA16Q6N069 864 aaPredicted RBP27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 CARMIL3Q8ND23 1372 aa27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 NRDCO43847 1150 aa27.8■■■□□ 2.04
CSNK1E-203ENST00000396832 SEC31AO94979 1220 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 ZRSR1Q15695 479 aaKnown RBP27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 TTC5Q8N0Z6 440 aa27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 MNS1Q8NEH6 495 aa27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 ZNF396Q96N95 335 aaPredicted RBP27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 FKBP4Q02790 459 aaKnown RBP eCLIP27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 NCAPD2Q15021 1401 aa27.79■■■□□ 2.04
CSNK1E-203ENST00000396832 STK38Q15208 465 aa27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 LRRC24Q50LG9 513 aa27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 MRPS27Q92552 414 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 FDPSP14324 419 aaKnown RBP27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 ANKLE2Q86XL3 938 aa27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 TXLNBQ8N3L3 684 aa27.78■■■□□ 2.04
CSNK1E-203ENST00000396832 M0R2C6 588 aa27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 ST5P78524 1137 aa27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 MAST3O60307 1309 aa27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 FMR1NBQ8N0W7 255 aaPredicted RBP27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 ZCCHC17Q9NP64 241 aaKnown RBP27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 PHLPP2Q6ZVD8 1323 aa27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 MYH15Q9Y2K3 1946 aa27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 KDM6AO15550 1401 aaPredicted RBP27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 LLPHQ9BRT6 129 aaKnown RBP27.77■■■□□ 2.04
CSNK1E-203ENST00000396832 USP54Q70EL1 1684 aa27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 URI1O94763 535 aaPredicted RBP27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 AFDNP55196 1824 aaKnown RBP27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 LMOD1P29536 600 aaPredicted RBP27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 GOLGA8FQ08AF8 430 aa27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 GOLGA8DPQ0D2H9 430 aa27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 DDX17Q92841 729 aaKnown RBP27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 SMARCE1Q969G3 411 aa27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 RGPD5Q99666 1765 aa27.76■■■□□ 2.03
CSNK1E-203ENST00000396832 TADA3O75528 432 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 EXOSC10Q01780 885 aaKnown RBP27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 KRBA2Q6ZNG9 492 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 CARD6Q9BX69 1037 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 KIAA1468Q9P260 1216 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 CSB-PGBD3P0DP91 1061 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 MARCKSP29966 332 aaPredicted RBP27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 MRC1P22897 1456 aa27.75■■■□□ 2.03
CSNK1E-203ENST00000396832 WASHC4Q2M389 1173 aa27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 ATL3Q6DD88 541 aa27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 TRIM65Q6PJ69 517 aa27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 SH3TC1Q8TE82 1336 aa27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 HSP90AA4PQ58FG1 418 aa27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 PUS3Q9BZE2 481 aaKnown RBP27.74■■■□□ 2.03
CSNK1E-203ENST00000396832 HMGB1P09429 215 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 IFIT1P09914 478 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 RXRAP19793 462 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 BPIFA3Q9BQP9 254 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 SRRTQ9BXP5 876 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 UBXN6Q9BZV1 441 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 ZNF330Q9Y3S2 320 aaPredicted RBP27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 SALL1Q9NSC2 1324 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 DHX8Q14562 1220 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 LRP10Q7Z4F1 713 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 EPC1Q9H2F5 836 aa27.73■■■□□ 2.03
CSNK1E-203ENST00000396832 EFCAB8A8MWE9 144 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 CCP110O43303 1012 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 ATP8B1O43520 1251 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 SASH3O75995 380 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 MUM1L1Q5H9M0 696 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 C8orf76Q96K31 380 aa27.72■■■□□ 2.03
CSNK1E-203ENST00000396832 FANCGO15287 622 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms