RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
SCFD1-202ENST00000396629 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
SCFD1-202ENST00000396629 IGHMBP2P38935 993 aaKnown RBP10.87□□□□□ -0.67
SCFD1-202ENST00000396629 IREB2P48200 963 aaKnown RBP10.87□□□□□ -0.67
SCFD1-202ENST00000396629 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
SCFD1-202ENST00000396629 CERS5Q8N5B7 392 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 IRS2Q9Y4H2 1338 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 KSR2Q6VAB6 950 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 NBPF11Q86T75 865 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 CENPFP49454 3210 aa10.87□□□□□ -0.67
SCFD1-202ENST00000396629 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 H7C1W4 665 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 ELL2O00472 640 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-202ENST00000396629 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 FKBP1AP62942 108 aaKnown RBP10.86□□□□□ -0.67
SCFD1-202ENST00000396629 ARHGEF6Q15052 776 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 CFAP100Q494V2 611 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 C15orf52Q6ZUT6 534 aaKnown RBP10.86□□□□□ -0.67
SCFD1-202ENST00000396629 MS4A4AQ96JQ5 239 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 PLA2G12BQ9BX93 195 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 PTCH2Q9Y6C5 1203 aa10.86□□□□□ -0.67
SCFD1-202ENST00000396629 CLRN2A0PK11 232 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 MYO1BO43795 1136 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 GNAI1P63096 354 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 CCDC30Q5VVM6 783 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 C8orf58Q8NAV2 365 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 PRMT6Q96LA8 375 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-202ENST00000396629 CHMP4AQ9BY43 222 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 AOX1Q06278 1338 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 PI4KAP2A4QPH2 592 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 NEURL1BA8MQ27 555 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 H0YGN5 161 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 ITGA6P23229 1130 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 PI4KAP1Q8N8J0 262 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 OPTNQ96CV9 577 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
SCFD1-202ENST00000396629 ARAP2Q8WZ64 1704 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 CSF1RP07333 972 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 IL1R1P14778 569 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 CHRNDQ07001 517 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 NEXNQ0ZGT2 675 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 RASA3Q14644 834 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 CWF19L2Q2TBE0 894 aaKnown RBP10.84□□□□□ -0.67
SCFD1-202ENST00000396629 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 BRI3BPQ8WY22 251 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 MPHOSPH8Q99549 860 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 ZFYVE28Q9HCC9 887 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 MYBBP1AQ9BQG0 1328 aaKnown RBP10.84□□□□□ -0.67
SCFD1-202ENST00000396629 KCNJ4P48050 445 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCFD1-202ENST00000396629 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
SCFD1-202ENST00000396629 BRCA2P51587 3418 aa10.83□□□□□ -0.68
SCFD1-202ENST00000396629 CASP7P55210 303 aa10.83□□□□□ -0.68
SCFD1-202ENST00000396629 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
SCFD1-202ENST00000396629 TAF1CQ15572 869 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-202ENST00000396629 F8W031 263 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-202ENST00000396629 SNAP23O00161 211 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 GTF2A2P52657 109 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-202ENST00000396629 TRIOBPQ9H2D6 2365 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 CCL15-CCL14A0A0B4J2E2 113 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 CCL15Q16663 113 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 ZNF804AQ7Z570 1209 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
SCFD1-202ENST00000396629 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-202ENST00000396629 TAF5LO75529 589 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 MAP3K9P80192 1104 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 TNFAIP1Q13829 316 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 GCKRQ14397 625 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 FAM43AQ8N2R8 423 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 TSPYL6Q8N831 410 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 SH3TC2Q8TF17 1288 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 CACNA1FO60840 1977 aa10.81□□□□□ -0.68
SCFD1-202ENST00000396629 ANKRD18BA2A2Z9 1011 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 GNRH1P01148 92 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 RBM5P52756 815 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCFD1-202ENST00000396629 PRMT2P55345 433 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 ZCCHC17Q9NP64 241 aaKnown RBP10.8□□□□□ -0.68
SCFD1-202ENST00000396629 CEP290O15078 2479 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 FAM205AQ6ZU69 1335 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 TLR2O60603 784 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 VGLL4Q14135 290 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 G2E3Q7L622 706 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-202ENST00000396629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCFD1-202ENST00000396629 SHISA4Q96DD7 197 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 ARHGAP39Q9C0H5 1083 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 PRO3102Q9H379 93 aa10.8□□□□□ -0.68
SCFD1-202ENST00000396629 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
SCFD1-202ENST00000396629 APAF1O14727 1248 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms