RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 USP28Q96RU2 1077 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 DSCC1Q9BVC3 393 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 ATG3Q9NT62 314 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
TRIM40-207ENST00000396581 PTPDC1A2A3K4 754 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 CCDC69A6NI79 296 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 TFCP2Q12800 502 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 CCDC73Q6ZRK6 1079 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 CCDC129Q6ZRS4 1044 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 CCAR2Q8N163 923 aaKnown RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 FBXL16Q8N461 479 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 KBTBD3Q8NAB2 608 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 SEC62Q99442 399 aaKnown RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 IMPACTQ9P2X3 320 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 LAMB4A4D0S4 1761 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 BCL9LQ86UU0 1499 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 KIF2AO00139 706 aaPredicted RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 KCNJ6P48051 423 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 GSDMDP57764 484 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 ZNF397Q8NF99 534 aaPredicted RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 ERO1AQ96HE7 468 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 NGLY1Q96IV0 654 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 BPIFA3Q9BQP9 254 aa15.56■□□□□ 0.08
TRIM40-207ENST00000396581 TEX13AQ9BXU3 409 aaPredicted RBP15.56■□□□□ 0.08
TRIM40-207ENST00000396581 BECN2A8MW95 431 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 KINO60870 393 aaKnown RBP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 FTOQ9C0B1 505 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 HELLSQ9NRZ9 838 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 A0A1W2PQ27 194 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 A0A1W2PQ64 194 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 A0A1W2PQD8 194 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 VPS72Q15906 364 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 CEP57L1Q8IYX8 460 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 FMR1NBQ8N0W7 255 aaPredicted RBP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 CHMP4CQ96CF2 233 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 ZNF274Q96GC6 653 aaPredicted RBP15.55■□□□□ 0.08
TRIM40-207ENST00000396581 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
TRIM40-207ENST00000396581 A1BGP04217 495 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 CHGBP05060 677 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 EVCP57679 992 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 PLBD2Q8NHP8 589 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 MYD88Q99836 296 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 DBNDD2Q9BQY9 259 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 RTEL1Q9NZ71 1219 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 ZNF215Q9UL58 517 aaPredicted RBP15.54■□□□□ 0.08
TRIM40-207ENST00000396581 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
TRIM40-207ENST00000396581 ITGB4P16144 1822 aa15.54■□□□□ 0.08
TRIM40-207ENST00000396581 KMT5BQ4FZB7 885 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 ADALQ6DHV7 355 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 MARCH10Q8NA82 808 aaPredicted RBP15.53■□□□□ 0.08
TRIM40-207ENST00000396581 LRRC2Q9BYS8 371 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 NAT10Q9H0A0 1025 aaKnown RBP15.53■□□□□ 0.08
TRIM40-207ENST00000396581 CASP7P55210 303 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 CEBPZQ03701 1054 aaKnown RBP15.53■□□□□ 0.08
TRIM40-207ENST00000396581 FSIP1Q8NA03 581 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 L2HGDHQ9H9P8 463 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 NEDD4P46934 1319 aa15.53■□□□□ 0.08
TRIM40-207ENST00000396581 SLFN14P0C7P3 912 aa15.52■□□□□ 0.08
TRIM40-207ENST00000396581 APOBRQ0VD83 1088 aa15.52■□□□□ 0.08
TRIM40-207ENST00000396581 DHX8Q14562 1220 aaKnown RBP15.52■□□□□ 0.08
TRIM40-207ENST00000396581 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.08
TRIM40-207ENST00000396581 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
TRIM40-207ENST00000396581 SLU7O95391 586 aaKnown RBP15.52■□□□□ 0.07
TRIM40-207ENST00000396581 PDIA3P30101 505 aaKnown RBP15.52■□□□□ 0.07
TRIM40-207ENST00000396581 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.07
TRIM40-207ENST00000396581 FILIP1Q7Z7B0 1213 aa15.52■□□□□ 0.07
TRIM40-207ENST00000396581 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
TRIM40-207ENST00000396581 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.07
TRIM40-207ENST00000396581 GPR108Q9NPR9 543 aa15.52■□□□□ 0.07
TRIM40-207ENST00000396581 PCDHA7Q9UN72 937 aa15.52■□□□□ 0.07
TRIM40-207ENST00000396581 CARMIL3Q8ND23 1372 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 KAT6BQ8WYB5 2073 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 PSDA5PKW4 1024 aaPredicted RBP15.51■□□□□ 0.07
TRIM40-207ENST00000396581 STARD3NLO95772 234 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 TUBB4AP04350 444 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 FGD1P98174 961 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 DDX46Q7L014 1031 aaKnown RBP15.51■□□□□ 0.07
TRIM40-207ENST00000396581 KRT222Q8N1A0 295 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
TRIM40-207ENST00000396581 E7EWF7 191 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 FDPSP14324 419 aaKnown RBP15.5■□□□□ 0.07
TRIM40-207ENST00000396581 ME1P48163 572 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 TAF3Q5VWG9 929 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 E4F1Q66K89 784 aaPredicted RBP15.5■□□□□ 0.07
TRIM40-207ENST00000396581 DNAJC10Q8IXB1 793 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 RGS22Q8NE09 1264 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 SYTL4Q96C24 671 aaPredicted RBP15.5■□□□□ 0.07
TRIM40-207ENST00000396581 SLC4A9Q96Q91 983 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 FAM193AP78312 1265 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 CCDC93Q567U6 631 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 CCDC150Q8NCX0 1101 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 KIAA1468Q9P260 1216 aa15.5■□□□□ 0.07
TRIM40-207ENST00000396581 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms