RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 INF2Q27J81 1249 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 CCT6BQ92526 530 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 C6orf229H3BNL8 230 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 HPDP32754 393 aaPredicted RBP15.74■□□□□ 0.11
COL4A3-202ENST00000396578 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
COL4A3-202ENST00000396578 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 SNRKQ9NRH2 765 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL4A3-202ENST00000396578 NAPAP54920 295 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 CRCPO75575 148 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 GEN1Q17RS7 908 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 BAG1Q99933 345 aaPredicted RBP15.74■□□□□ 0.11
COL4A3-202ENST00000396578 TSNAXIP1Q2TAA8 658 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 NUF2Q9BZD4 464 aa15.74■□□□□ 0.11
COL4A3-202ENST00000396578 GKAP1Q5VSY0 366 aaPredicted RBP15.73■□□□□ 0.11
COL4A3-202ENST00000396578 GPTP24298 496 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 RBM8AQ9Y5S9 174 aaKnown RBP15.73■□□□□ 0.11
COL4A3-202ENST00000396578 TTC21BQ7Z4L5 1316 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 AKR1B15C9JRZ8 316 aaPredicted RBP15.73■□□□□ 0.11
COL4A3-202ENST00000396578 NCBP1Q09161 790 aaKnown RBP15.73■□□□□ 0.11
COL4A3-202ENST00000396578 CLUL1Q15846 466 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 CCDC122Q5T0U0 273 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 ESYT1Q9BSJ8 1104 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 LRRC2Q9BYS8 371 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 CALM1P0DP23 149 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 CALM2P0DP24 149 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 CALM3P0DP25 149 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 EVCP57679 992 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 FAM160A1Q05DH4 1040 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 DPH6Q7L8W6 267 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
COL4A3-202ENST00000396578 TUBB2AQ13885 445 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 ZBTB9Q96C00 473 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 TUBB2BQ9BVA1 445 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 UAP1Q16222 522 aaPredicted RBP15.72■□□□□ 0.11
COL4A3-202ENST00000396578 HS2ST1Q7LGA3 356 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 NSD2O96028 1365 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 CLNS1AP54105 237 aaKnown RBP15.72■□□□□ 0.11
COL4A3-202ENST00000396578 INPP5BP32019 993 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 VCXQ9H320 206 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 NDUFAB1O14561 156 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 IGHDP01880 384 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 HSPA1LP34931 641 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 SATB1Q01826 763 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 AGTPBP1Q9UPW5 1226 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 SPDYE3A6NKU9 549 aa15.72■□□□□ 0.11
COL4A3-202ENST00000396578 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
COL4A3-202ENST00000396578 ACTN4O43707 911 aaKnown RBP15.71■□□□□ 0.11
COL4A3-202ENST00000396578 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
COL4A3-202ENST00000396578 CA8P35219 290 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 PPP1R12CQ9BZL4 782 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 GOLGA6CA6NDK9 693 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 GOLGA6DP0CG33 693 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 TAOK1Q7L7X3 1001 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 GOLGA6AQ9NYA3 693 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 HDAC9Q9UKV0 1011 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 NAIPQ13075 1403 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 ZNF526Q8TF50 670 aaPredicted RBP15.71■□□□□ 0.11
COL4A3-202ENST00000396578 PFDN4Q9NQP4 134 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 SDCCAG8Q86SQ7 713 aaPredicted RBP15.71■□□□□ 0.11
COL4A3-202ENST00000396578 FRMD4BQ9Y2L6 1034 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 SLC4A4Q9Y6R1 1079 aa15.71■□□□□ 0.11
COL4A3-202ENST00000396578 PHLDB2Q86SQ0 1253 aa15.71■□□□□ 0.1
COL4A3-202ENST00000396578 ARHGEF2Q92974 986 aaKnown RBP15.71■□□□□ 0.1
COL4A3-202ENST00000396578 BRAPQ7Z569 592 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL4A3-202ENST00000396578 IL16Q14005 1332 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 DTHD1Q6ZMT9 781 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 KIFAP3Q92845 792 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 ARHGAP25P42331 645 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 CCDC170Q8IYT3 715 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 ARHGAP24Q8N264 748 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL4A3-202ENST00000396578 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 AFAP1L2Q8N4X5 818 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 MCUR1Q96AQ8 359 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 TBC1D31Q96DN5 1066 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 RAB3GAP1Q15042 981 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 KRT79Q5XKE5 535 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 CCDC65Q8IXS2 484 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 IFT20Q8IY31 132 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 TCHPQ9BT92 498 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 ZBTB3Q9H5J0 574 aa15.7■□□□□ 0.1
COL4A3-202ENST00000396578 TRIM14Q14142 442 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 NAPGQ99747 312 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 TACC3Q9Y6A5 838 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 E7EVH7 732 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 ERCC5P28715 1186 aaPredicted RBP15.69■□□□□ 0.1
COL4A3-202ENST00000396578 FAM212AQ96EL1 285 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 USH1CQ9Y6N9 552 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 PI4KAP2A4QPH2 592 aa15.69■□□□□ 0.1
COL4A3-202ENST00000396578 PI4KAP1Q8N8J0 262 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms