RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CCDC102BQ68D86 513 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 HELBQ8NG08 1087 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-205ENST00000396551 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 USP25Q9UHP3 1055 aa19.51■□□□□ 0.71
TRIM39-205ENST00000396551 NAP1L2Q9ULW6 460 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-205ENST00000396551 FGFR2P21802 821 aa19.5■□□□□ 0.71
TRIM39-205ENST00000396551 ADD1P35611 737 aaKnown RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 CRKLP46109 303 aaKnown RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 NAA16Q6N069 864 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
TRIM39-205ENST00000396551 ARID4AP29374 1257 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 CDCA7Q9BWT1 371 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRIM39-205ENST00000396551 ZKSCAN5Q9Y2L8 839 aa19.5■□□□□ 0.71
TRIM39-205ENST00000396551 ANTXR2P58335 489 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 A0A0G2JS52 829 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 ITPK1Q13572 414 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 SLC9C2Q5TAH2 1124 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 NBPF3Q9H094 633 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 DACT1Q9NYF0 836 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
TRIM39-205ENST00000396551 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
TRIM39-205ENST00000396551 FAM177BA6PVY3 158 aa19.48■□□□□ 0.71
TRIM39-205ENST00000396551 PRC1O43663 620 aa19.48■□□□□ 0.71
TRIM39-205ENST00000396551 FDPSP14324 419 aaKnown RBP19.48■□□□□ 0.71
TRIM39-205ENST00000396551 CAMK4Q16566 473 aa19.48■□□□□ 0.71
TRIM39-205ENST00000396551 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
TRIM39-205ENST00000396551 DOCK2Q92608 1830 aa19.48■□□□□ 0.71
TRIM39-205ENST00000396551 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
TRIM39-205ENST00000396551 NAP1L5Q96NT1 182 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-205ENST00000396551 TTF1Q15361 905 aaPredicted RBP19.47■□□□□ 0.71
TRIM39-205ENST00000396551 PUM3Q15397 648 aaKnown RBP19.47■□□□□ 0.71
TRIM39-205ENST00000396551 ZSCAN25Q6NSZ9 544 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 LPIN2Q92539 896 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 AK7Q96M32 723 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 MROH5Q6ZUA9 1318 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 CARMIL3Q8ND23 1372 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 SNAP23O00161 211 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 SIK1P57059 783 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 NKX2-3Q8TAU0 364 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 SEC31BQ9NQW1 1179 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 WWC3Q9ULE0 1092 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 LAMB2P55268 1798 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 IDH1O75874 414 aaKnown RBP19.47■□□□□ 0.71
TRIM39-205ENST00000396551 MAP3K11Q16584 847 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 FTOQ9C0B1 505 aaKnown RBP eCLIP19.47■□□□□ 0.71
TRIM39-205ENST00000396551 DENND2AQ9ULE3 1009 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 ZNF532Q9HCE3 1301 aa19.47■□□□□ 0.71
TRIM39-205ENST00000396551 C4AP0C0L4 1744 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 C4BP0C0L5 1744 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 TCRBV5S4A2TA0A5A2 114 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 ZNF213O14771 459 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 ZNF500O60304 480 aaPredicted RBP19.46■□□□□ 0.71
TRIM39-205ENST00000396551 MCM5P33992 734 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 UBE3CQ15386 1083 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 NCOA7Q8NI08 942 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 HPS5Q9UPZ3 1129 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 NR1I2O75469 434 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 ADCY5O95622 1261 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 PDE6AP16499 860 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 LTBP4Q8N2S1 1624 aa19.46■□□□□ 0.71
TRIM39-205ENST00000396551 AP5Z1O43299 807 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 KDM4AO75164 1064 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 UQCRFS1P1P0C7P4 283 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 CCDC192P0DO97 292 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 GUCY1B3Q02153 619 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 ILDR1Q86SU0 546 aaPredicted RBP19.46■□□□□ 0.7
TRIM39-205ENST00000396551 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.7
TRIM39-205ENST00000396551 KIF3AQ9Y496 699 aa19.46■□□□□ 0.7
TRIM39-205ENST00000396551 CEBPZQ03701 1054 aaKnown RBP19.45■□□□□ 0.7
TRIM39-205ENST00000396551 CLSTN2Q9H4D0 955 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 DDX19AQ9NUU7 478 aaKnown RBP19.45■□□□□ 0.7
TRIM39-205ENST00000396551 CFAP45Q9UL16 551 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 COL4A1P02462 1669 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 SPATA31A5Q5VU36 1347 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 SPATA31A7Q8IWB4 1347 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 RBM43Q6ZSC3 357 aaKnown RBP19.45■□□□□ 0.7
TRIM39-205ENST00000396551 TBC1D10CQ8IV04 446 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 MRVI1Q9Y6F6 885 aa19.45■□□□□ 0.7
TRIM39-205ENST00000396551 KLF18A0A0U1RQI7 1052 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 CKAP2LQ8IYA6 745 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 TNMDQ9H2S6 317 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 COL5A3P25940 1745 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-205ENST00000396551 NTSR2O95665 410 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 TYRO3Q06418 890 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 RALYLQ86SE5 291 aaKnown RBP19.44■□□□□ 0.7
TRIM39-205ENST00000396551 RAB11FIP4Q86YS3 637 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 USP28Q96RU2 1077 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 RCOR1Q9UKL0 485 aa19.44■□□□□ 0.7
TRIM39-205ENST00000396551 BCORQ6W2J9 1755 aa19.43■□□□□ 0.7
TRIM39-205ENST00000396551 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
TRIM39-205ENST00000396551 PTMAP06454 111 aaKnown RBP19.43■□□□□ 0.7
TRIM39-205ENST00000396551 GOLGA8BA8MQT2 603 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 OFD1O75665 1012 aa19.42■□□□□ 0.7
TRIM39-205ENST00000396551 SLC5A1P13866 664 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms