RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 BRF1Q92994 677 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 F13A1P00488 732 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
ITGB1-202ENST00000396033 WWC3Q9ULE0 1092 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 SBF2Q86WG5 1849 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 PDE6AP16499 860 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 CAVIN1Q6NZI2 390 aaKnown RBP14.39□□□□□ -0.11
ITGB1-202ENST00000396033 ZNF532Q9HCE3 1301 aa14.39□□□□□ -0.11
ITGB1-202ENST00000396033 VPS37CA5D8V6 355 aaPredicted RBP14.38□□□□□ -0.11
ITGB1-202ENST00000396033 HAND2P61296 217 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 GPT2Q8TD30 523 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 CASZ1Q86V15 1759 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
ITGB1-202ENST00000396033 TAF1LQ8IZX4 1826 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 ONECUT3O60422 494 aaPredicted RBP14.38□□□□□ -0.11
ITGB1-202ENST00000396033 FGAP02671 866 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 BCAMP50895 628 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 AMIGO3Q86WK7 504 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 PHF14O94880 888 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
ITGB1-202ENST00000396033 MTMR6Q9Y217 621 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 ATP6V1DQ9Y5K8 247 aa14.38□□□□□ -0.11
ITGB1-202ENST00000396033 C4BP0C0L5 1744 aa14.37□□□□□ -0.11
ITGB1-202ENST00000396033 SLC10A5Q5PT55 438 aa14.37□□□□□ -0.11
ITGB1-202ENST00000396033 LARP1BQ659C4 914 aaKnown RBP14.37□□□□□ -0.11
ITGB1-202ENST00000396033 GDPD2Q9HCC8 539 aa14.37□□□□□ -0.11
ITGB1-202ENST00000396033 ISY1Q9ULR0 285 aaKnown RBP14.37□□□□□ -0.11
ITGB1-202ENST00000396033 EXOSC10Q01780 885 aaKnown RBP14.37□□□□□ -0.11
ITGB1-202ENST00000396033 MAP3K12Q12852 859 aa14.37□□□□□ -0.11
ITGB1-202ENST00000396033 AEBP2Q6ZN18 517 aaPredicted RBP14.37□□□□□ -0.11
ITGB1-202ENST00000396033 BSDC1Q9NW68 430 aaPredicted RBP14.37□□□□□ -0.11
ITGB1-202ENST00000396033 PDCP20941 246 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 TCRBV5S4A2TA0A5A2 114 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 MBD3O95983 291 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 MAGEB6Q8N7X4 407 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 RFC4P35249 363 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
ITGB1-202ENST00000396033 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
ITGB1-202ENST00000396033 TAF1P21675 1872 aa14.36□□□□□ -0.11
ITGB1-202ENST00000396033 ZNF213O14771 459 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 APOBRQ0VD83 1088 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 TPTE2Q6XPS3 522 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 CHST3Q7LGC8 479 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 CCDC24Q8N4L8 307 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
ITGB1-202ENST00000396033 DOCK2Q92608 1830 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 NPHP1O15259 732 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 APPP05067 770 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 MRE11P49959 708 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 FAM196AQ6ZSG2 479 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 CNPY2Q9Y2B0 182 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 A0A1B0GUL6 1792 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 C4AP0C0L4 1744 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
ITGB1-202ENST00000396033 USP48Q86UV5 1035 aa14.35□□□□□ -0.11
ITGB1-202ENST00000396033 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
ITGB1-202ENST00000396033 NAP1L2Q9ULW6 460 aaPredicted RBP14.35□□□□□ -0.11
ITGB1-202ENST00000396033 JAK2O60674 1132 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 SCRN1Q12765 414 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 ZSCAN23Q3MJ62 389 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 AGXT2Q9BYV1 514 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 PFKFB2O60825 505 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 UBE4AQ14139 1066 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 GAS2L3Q86XJ1 694 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
ITGB1-202ENST00000396033 CLCN1P35523 988 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
ITGB1-202ENST00000396033 RALYLQ86SE5 291 aaKnown RBP14.34□□□□□ -0.11
ITGB1-202ENST00000396033 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
ITGB1-202ENST00000396033 GYG1P46976 350 aa14.33□□□□□ -0.11
ITGB1-202ENST00000396033 GNL3LQ9NVN8 582 aaKnown RBP14.33□□□□□ -0.11
ITGB1-202ENST00000396033 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 NCOA7Q8NI08 942 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 MBD4O95243 580 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
ITGB1-202ENST00000396033 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 TCHHQ07283 1943 aa14.33□□□□□ -0.12
ITGB1-202ENST00000396033 FIBPO43427 364 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 RPS8P62241 208 aaKnown RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 MB21D2Q8IYB1 491 aaPredicted RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 ZNF804BA4D1E1 1349 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 PRC1O43663 620 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 MCM5P33992 734 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 CARMIL3Q8ND23 1372 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 ZNF445P59923 1031 aa14.32□□□□□ -0.12
ITGB1-202ENST00000396033 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
ITGB1-202ENST00000396033 FERMT3Q86UX7 667 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms