RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
UBFD1-201ENST00000395878 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
UBFD1-201ENST00000395878 CARD14Q9BXL6 1004 aa19.68■□□□□ 0.74
UBFD1-201ENST00000395878 A0A1W2PP64 1363 aa19.68■□□□□ 0.74
UBFD1-201ENST00000395878 GOLGA1Q92805 767 aa19.68■□□□□ 0.74
UBFD1-201ENST00000395878 KRT24Q2M2I5 525 aa19.68■□□□□ 0.74
UBFD1-201ENST00000395878 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
UBFD1-201ENST00000395878 TEX14Q8IWB6 1497 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 MAGEB6Q8N7X4 407 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 PTGS1P23219 599 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 CCDC42Q96M95 316 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 OPA1O60313 960 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 GNA11P29992 359 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 DRC1Q96MC2 740 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
UBFD1-201ENST00000395878 CHST3Q7LGC8 479 aa19.67■□□□□ 0.74
UBFD1-201ENST00000395878 TRPM2O94759 1503 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 PICALMQ13492 652 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 BICC1Q9H694 974 aaKnown RBP19.66■□□□□ 0.74
UBFD1-201ENST00000395878 RBM28Q9NW13 759 aaKnown RBP19.66■□□□□ 0.74
UBFD1-201ENST00000395878 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 MCM9Q9NXL9 1143 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 RNMTO43148 476 aaKnown RBP19.66■□□□□ 0.74
UBFD1-201ENST00000395878 DDB1Q16531 1140 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 ACSBG1Q96GR2 724 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 TRERF1Q96PN7 1200 aa19.66■□□□□ 0.74
UBFD1-201ENST00000395878 DDX21Q9NR30 783 aaKnown RBP eCLIP19.66■□□□□ 0.74
UBFD1-201ENST00000395878 TPTE2Q6XPS3 522 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 TSNARE1Q96NA8 513 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 SYNCQ9H7C4 482 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 SPDYE3A6NKU9 549 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 C6orf163Q5TEZ5 329 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 CCDC77Q9BR77 488 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
UBFD1-201ENST00000395878 F8W031 263 aaPredicted RBP19.64■□□□□ 0.74
UBFD1-201ENST00000395878 PHACTR2O75167 634 aa19.64■□□□□ 0.74
UBFD1-201ENST00000395878 UBXN1Q04323 297 aa19.64■□□□□ 0.74
UBFD1-201ENST00000395878 MCM6Q14566 821 aa19.64■□□□□ 0.74
UBFD1-201ENST00000395878 NSRP1Q9H0G5 558 aaKnown RBP19.64■□□□□ 0.74
UBFD1-201ENST00000395878 IFNKQ9P0W0 207 aa19.64■□□□□ 0.74
UBFD1-201ENST00000395878 IVLP07476 585 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 NEK11Q8NG66 645 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 A0A1W2PRG0 241 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 DTHD1Q6ZMT9 781 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 OGFOD1Q8N543 542 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 MIGA1Q8NAN2 632 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 HOXC9P31274 260 aa19.64■□□□□ 0.73
UBFD1-201ENST00000395878 STMN4Q9H169 189 aaPredicted RBP19.63■□□□□ 0.73
UBFD1-201ENST00000395878 ELP1O95163 1332 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 TNNI2P48788 182 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 TRAPPC8Q9Y2L5 1435 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 IP6K1Q92551 441 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 AOX1Q06278 1338 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 PPP1R14CQ8TAE6 165 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 MRVI1Q9Y6F6 885 aa19.63■□□□□ 0.73
UBFD1-201ENST00000395878 MCM7P33993 719 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 STX17P56962 302 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 FAM160A1Q05DH4 1040 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 IMPG2Q9BZV3 1241 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 GCP02774 474 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 TUBBP07437 444 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 COMMD10Q9Y6G5 202 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 RPS6KB1P23443 525 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 MYL5Q02045 173 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 HELBQ8NG08 1087 aaPredicted RBP19.62■□□□□ 0.73
UBFD1-201ENST00000395878 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 PER1O15534 1290 aaPredicted RBP19.62■□□□□ 0.73
UBFD1-201ENST00000395878 FAM13AO94988 1023 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 CNGA4Q8IV77 575 aa19.62■□□□□ 0.73
UBFD1-201ENST00000395878 LUC7L2Q9Y383 392 aaKnown RBP19.62■□□□□ 0.73
UBFD1-201ENST00000395878 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 NAP1L4Q99733 375 aaKnown RBP19.61■□□□□ 0.73
UBFD1-201ENST00000395878 COL17A1Q9UMD9 1497 aaPredicted RBP19.61■□□□□ 0.73
UBFD1-201ENST00000395878 SEC24BO95487 1268 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 HOXB7P09629 217 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 PCDH11XQ9BZA7 1347 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 PCDH11YQ9BZA8 1340 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 HSPA4P34932 840 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 MAP3K19Q56UN5 1328 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 WDR7Q9Y4E6 1490 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 TIGD1Q96MW7 591 aa19.61■□□□□ 0.73
UBFD1-201ENST00000395878 LDHBP07195 334 aaKnown RBP19.6■□□□□ 0.73
UBFD1-201ENST00000395878 PPP1R2P41236 205 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 ZC3H12CQ9C0D7 883 aaKnown RBP19.6■□□□□ 0.73
UBFD1-201ENST00000395878 SREK1Q8WXA9 508 aaKnown RBP19.6■□□□□ 0.73
UBFD1-201ENST00000395878 IQCGQ9H095 443 aaKnown RBP19.6■□□□□ 0.73
UBFD1-201ENST00000395878 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 RILPL1Q5EBL4 403 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 GUCA1BQ9UMX6 200 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 ATP2A1O14983 1001 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 FERP16591 822 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 ARID5AQ03989 594 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 CEP63Q96MT8 703 aa19.6■□□□□ 0.73
UBFD1-201ENST00000395878 EYA2O00167 538 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms