RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CHL1O00533 1208 aa17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 GNRH1P01148 92 aa17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 LACTBP83111 547 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 TAF1CQ15572 869 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 CERS5Q8N5B7 392 aa17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
VCPKMT-201ENST00000395859 MUC3AQ02505 3323 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 HOXB7P09629 217 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 PRMT2P55345 433 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 HTATIP2Q9BUP3 242 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 NR2E3Q9Y5X4 410 aa17.86■□□□□ 0.45
VCPKMT-201ENST00000395859 TLR2O60603 784 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 GJB1P08034 283 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 KLRK1P26718 216 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 CTGFP29279 349 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 HDGFL1Q5TGJ6 251 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 NKX2-3Q8TAU0 364 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 FBXW7Q969H0 707 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 STXBP5LQ9Y2K9 1186 aa17.85■□□□□ 0.45
VCPKMT-201ENST00000395859 PRUNE2Q8WUY3 3088 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 IRS2Q9Y4H2 1338 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 CCL15-CCL14A0A0B4J2E2 113 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 CCL15Q16663 113 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 PRMT6Q96LA8 375 aaPredicted RBP17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
VCPKMT-201ENST00000395859 RIPK4P57078 832 aa17.83■□□□□ 0.44
VCPKMT-201ENST00000395859 GTF2IP78347 998 aa17.83■□□□□ 0.44
VCPKMT-201ENST00000395859 CDC5LQ99459 802 aaKnown RBP17.83■□□□□ 0.44
VCPKMT-201ENST00000395859 ZCCHC17Q9NP64 241 aaKnown RBP17.83■□□□□ 0.44
VCPKMT-201ENST00000395859 LEMD3Q9Y2U8 911 aa17.83■□□□□ 0.44
VCPKMT-201ENST00000395859 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 GTF2A2P52657 109 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 RASA3Q14644 834 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 TEPSINQ96N21 525 aa17.82■□□□□ 0.44
VCPKMT-201ENST00000395859 CTSWP56202 376 aa17.81■□□□□ 0.44
VCPKMT-201ENST00000395859 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
VCPKMT-201ENST00000395859 ALPK3Q96L96 1907 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 CCL5P13501 91 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 BMP8BP34820 402 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 VGLL4Q14135 290 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 CDAN1Q8IWY9 1227 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 GDF15Q99988 308 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 GREM2Q9H772 168 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 CD209Q9NNX6 404 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 STAP2Q9UGK3 403 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 MYH3P11055 1940 aa17.8■□□□□ 0.44
VCPKMT-201ENST00000395859 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 KIF22Q14807 665 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 MYD88Q99836 296 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
VCPKMT-201ENST00000395859 TTC28Q96AY4 2481 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 FARP2O94887 1054 aaPredicted RBP17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 GRK4P32298 578 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 Q7L0L9 218 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 U2AF1L4Q8WU68 220 aaKnown RBP17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 VEZTQ9HBM0 779 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 RIPOR2Q9Y4F9 1068 aa17.78■□□□□ 0.44
VCPKMT-201ENST00000395859 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
VCPKMT-201ENST00000395859 MYO1BO43795 1136 aa17.77■□□□□ 0.44
VCPKMT-201ENST00000395859 OSBPP22059 807 aa17.77■□□□□ 0.44
VCPKMT-201ENST00000395859 MAP3K9P80192 1104 aa17.77■□□□□ 0.44
VCPKMT-201ENST00000395859 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.44
VCPKMT-201ENST00000395859 ARAP2Q8WZ64 1704 aa17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 LRIT3Q3SXY7 679 aa17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
VCPKMT-201ENST00000395859 IL1R1P14778 569 aa17.75■□□□□ 0.43
VCPKMT-201ENST00000395859 PSMC4P43686 418 aa17.75■□□□□ 0.43
VCPKMT-201ENST00000395859 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
VCPKMT-201ENST00000395859 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
VCPKMT-201ENST00000395859 METTL22Q9BUU2 404 aaPredicted RBP17.75■□□□□ 0.43
VCPKMT-201ENST00000395859 EVI5O60447 810 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 SGPL1O95470 568 aa17.74■□□□□ 0.43
VCPKMT-201ENST00000395859 CETPP11597 493 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms