RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 RANBP17Q9H2T7 1088 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 SNUPNO95149 360 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 PAX3P23760 479 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 CWC27Q6UX04 472 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 MICALL1Q8N3F8 863 aa10.34□□□□□ -0.75
MSH5-205ENST00000395853 N4BP2L2Q92802 583 aaPredicted RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 THUMPD2Q9BTF0 503 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
MSH5-205ENST00000395853 RGPD5Q99666 1765 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 NFAT5O94916 1531 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 RPS6KA5O75582 802 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 ZRANB2O95218 330 aaKnown RBP eCLIP10.33□□□□□ -0.76
MSH5-205ENST00000395853 CSB-PGBD3P0DP91 1061 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 HNRNPH1P31943 449 aaKnown RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 ARMC3Q5W041 872 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 SDR16C5Q8N3Y7 309 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 JPH2Q9BR39 696 aaPredicted RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 CRACR2AQ9BSW2 395 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 ATP8B1O43520 1251 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 SLU7O95391 586 aaKnown RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 NF2P35240 595 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 NFE2L2Q16236 605 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 TMCO3Q6UWJ1 677 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 LRRC31Q6UY01 552 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 ARGLU1Q9NWB6 273 aaPredicted RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 ADAM21Q9UKJ8 722 aa10.33□□□□□ -0.76
MSH5-205ENST00000395853 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
MSH5-205ENST00000395853 USP54Q70EL1 1684 aa10.32□□□□□ -0.76
MSH5-205ENST00000395853 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
MSH5-205ENST00000395853 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 NCAPG2Q86XI2 1143 aa10.32□□□□□ -0.76
MSH5-205ENST00000395853 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 ECM2O94769 699 aaPredicted RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
MSH5-205ENST00000395853 ANKRD18AQ8IVF6 992 aa10.32□□□□□ -0.76
MSH5-205ENST00000395853 CDKL5O76039 1030 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 ERLIN2O94905 339 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 OATP04181 439 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 TPD52L1Q16890 204 aaPredicted RBP10.31□□□□□ -0.76
MSH5-205ENST00000395853 MICAL1Q8TDZ2 1067 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 MCM8Q9UJA3 840 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 BLOC1S6Q9UL45 172 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 FAM107BQ9H098 131 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
MSH5-205ENST00000395853 EME2A4GXA9 379 aaPredicted RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 PES1O00541 588 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 NPHP1O15259 732 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 IMPDH2P12268 514 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 PECAM1P16284 738 aaPredicted RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 EIF4A2Q14240 407 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 SMC1AQ14683 1233 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 PLEKHO1Q53GL0 409 aaPredicted RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 ZKSCAN2Q63HK3 967 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 MMTAG2Q9BU76 263 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 BTAF1O14981 1849 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 RDXP35241 583 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 PRPHP41219 470 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 EIF5P55010 431 aaKnown RBP10.3□□□□□ -0.76
MSH5-205ENST00000395853 SCRN1Q12765 414 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 HSP90AB2PQ58FF8 381 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 ERBB3P21860 1342 aa10.3□□□□□ -0.76
MSH5-205ENST00000395853 RTN2O75298 545 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 IL2RBP14784 551 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 GPTP24298 496 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 CHMLP26374 656 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 GPR162Q16538 588 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 HHATQ5VTY9 493 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 KCNV1Q6PIU1 500 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 MYLK4Q86YV6 388 aaPredicted RBP10.29□□□□□ -0.76
MSH5-205ENST00000395853 SPC24Q8NBT2 197 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 NOB1Q9ULX3 412 aaKnown RBP10.29□□□□□ -0.76
MSH5-205ENST00000395853 TMCO5BA8MYB1 307 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 ANKRD65E5RJM6 399 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 GCKP35557 465 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
MSH5-205ENST00000395853 KAT2BQ92831 832 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
MSH5-205ENST00000395853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.29□□□□□ -0.76
MSH5-205ENST00000395853 RBM47A0AV96 593 aaKnown RBP10.28□□□□□ -0.76
MSH5-205ENST00000395853 TRIM27P14373 513 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 MRPL12P52815 198 aaKnown RBP10.28□□□□□ -0.76
MSH5-205ENST00000395853 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 SULT6B1Q6IMI4 303 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 LZTS2Q9BRK4 669 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 PTGS1P23219 599 aa10.28□□□□□ -0.76
MSH5-205ENST00000395853 HMGB2P26583 209 aaKnown RBP10.28□□□□□ -0.76
MSH5-205ENST00000395853 MVPQ14764 893 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms