RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 SOGA3Q5TF21 947 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
PTPN20-206ENST00000395722 PPP1R1BQ9UD71 204 aaPredicted RBP18.28■□□□□ 0.52
PTPN20-206ENST00000395722 RAD50Q92878 1312 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
PTPN20-206ENST00000395722 LRRFIP1Q32MZ4 808 aaKnown RBP18.28■□□□□ 0.52
PTPN20-206ENST00000395722 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 PSMD1Q99460 953 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
PTPN20-206ENST00000395722 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
PTPN20-206ENST00000395722 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
PTPN20-206ENST00000395722 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.52
PTPN20-206ENST00000395722 ZMYM1Q5SVZ6 1142 aa18.27■□□□□ 0.52
PTPN20-206ENST00000395722 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
PTPN20-206ENST00000395722 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
PTPN20-206ENST00000395722 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
PTPN20-206ENST00000395722 ZC3H12CQ9C0D7 883 aaKnown RBP18.27■□□□□ 0.52
PTPN20-206ENST00000395722 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 REC8O95072 547 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 CHGBP05060 677 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
PTPN20-206ENST00000395722 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
PTPN20-206ENST00000395722 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 IGSF3O75054 1194 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 ADD2P35612 726 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 ZSCAN25Q6NSZ9 544 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 CHD4Q14839 1912 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 FER1L6Q2WGJ9 1857 aa18.25■□□□□ 0.51
PTPN20-206ENST00000395722 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
PTPN20-206ENST00000395722 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 UBE3CQ15386 1083 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
PTPN20-206ENST00000395722 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
PTPN20-206ENST00000395722 PDE6AP16499 860 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 MAP3K12Q12852 859 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 WDR66Q8TBY9 1149 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
PTPN20-206ENST00000395722 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
PTPN20-206ENST00000395722 APPBP2Q92624 585 aa18.23■□□□□ 0.51
PTPN20-206ENST00000395722 TBC1D32Q96NH3 1257 aa18.23■□□□□ 0.51
PTPN20-206ENST00000395722 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
PTPN20-206ENST00000395722 MAST2Q6P0Q8 1798 aa18.23■□□□□ 0.51
PTPN20-206ENST00000395722 CHAF1AQ13111 956 aaPredicted RBP18.22■□□□□ 0.51
PTPN20-206ENST00000395722 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 SLC9C2Q5TAH2 1124 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 FHDC1Q9C0D6 1143 aaPredicted RBP18.22■□□□□ 0.51
PTPN20-206ENST00000395722 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
PTPN20-206ENST00000395722 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
PTPN20-206ENST00000395722 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 OSBP2Q969R2 916 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 LRP2BPQ9P2M1 347 aa18.22■□□□□ 0.51
PTPN20-206ENST00000395722 MAST3O60307 1309 aa18.21■□□□□ 0.51
PTPN20-206ENST00000395722 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
PTPN20-206ENST00000395722 SOCS7O14512 581 aa18.21■□□□□ 0.51
PTPN20-206ENST00000395722 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
PTPN20-206ENST00000395722 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
PTPN20-206ENST00000395722 SEC62Q99442 399 aaKnown RBP18.21■□□□□ 0.51
PTPN20-206ENST00000395722 RBM19Q9Y4C8 960 aaKnown RBP18.21■□□□□ 0.51
PTPN20-206ENST00000395722 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
PTPN20-206ENST00000395722 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.5
PTPN20-206ENST00000395722 DOK7Q18PE1 504 aa18.21■□□□□ 0.5
PTPN20-206ENST00000395722 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.5
PTPN20-206ENST00000395722 ABCF2Q9UG63 623 aa18.21■□□□□ 0.5
PTPN20-206ENST00000395722 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 AOC3Q16853 763 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
PTPN20-206ENST00000395722 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 ZNF384Q8TF68 577 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 ANO2Q9NQ90 1003 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 BCS1LQ9Y276 419 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 CCDC171Q6TFL3 1326 aa18.2■□□□□ 0.5
PTPN20-206ENST00000395722 M0R2C6 588 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 JAG2Q9Y219 1238 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 CCDC88AQ3V6T2 1871 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 COL4A5P29400 1685 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 NFKBIEO00221 500 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 ECE2O60344 883 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 PRDX5P30044 214 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 NSUN4Q96CB9 384 aaKnown RBP18.19■□□□□ 0.5
PTPN20-206ENST00000395722 SYT17Q9BSW7 474 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 PUS7LQ9H0K6 701 aaKnown RBP18.19■□□□□ 0.5
PTPN20-206ENST00000395722 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
PTPN20-206ENST00000395722 CCDC129Q6ZRS4 1044 aa18.18■□□□□ 0.5
PTPN20-206ENST00000395722 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
PTPN20-206ENST00000395722 PSME4Q14997 1843 aa18.18■□□□□ 0.5
PTPN20-206ENST00000395722 GTF2IP78347 998 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms