RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 DNAJC5GQ8N7S2 189 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 SLC52A1Q9NWF4 448 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 KCNH4Q9UQ05 1017 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 LAMC1P11047 1609 aa8.58□□□□□ -1.04
AP3S1-202ENST00000395548 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 MARF1Q9Y4F3 1742 aaKnown RBP8.57□□□□□ -1.04
AP3S1-202ENST00000395548 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
AP3S1-202ENST00000395548 GNB5O14775 395 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 SIN3BO75182 1162 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 TRIM37O94972 964 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 KCNQ4P56696 695 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 RTN1Q16799 776 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 GPAT2Q6NUI2 795 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 LINC00114Q6XXX2 140 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 ZNF280CQ8ND82 737 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 DLC1Q96QB1 1528 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
AP3S1-202ENST00000395548 NRKQ7Z2Y5 1582 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 EHBP1L1Q8N3D4 1523 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 ELOA3CA0A087WX78 387 aaPredicted RBP8.56□□□□□ -1.04
AP3S1-202ENST00000395548 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
AP3S1-202ENST00000395548 LGR5O75473 907 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 TYRO3Q06418 890 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 SPEM2Q0P670 501 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.044e-6■■■■■ 72.1
AP3S1-202ENST00000395548 C1orf167Q5SNV9 1468 aa8.56□□□□□ -1.04
AP3S1-202ENST00000395548 TRPM2O94759 1503 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 FOXO3O43524 673 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
AP3S1-202ENST00000395548 WEE1P30291 646 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 DGKGP49619 791 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
AP3S1-202ENST00000395548 ZFYVE9O95405 1425 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 ADGRL3Q9HAR2 1447 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 SHANK3Q9BYB0 1731 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 TNS1Q9HBL0 1735 aaKnown RBP8.54□□□□□ -1.04
AP3S1-202ENST00000395548 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 IER5Q5VY09 327 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 NOP53Q9NZM5 478 aaKnown RBP8.54□□□□□ -1.04
AP3S1-202ENST00000395548 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
AP3S1-202ENST00000395548 NOS1P29475 1434 aa8.54□□□□□ -1.04
AP3S1-202ENST00000395548 TGFBR3LH3BV60 316 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 EFCC1Q9HA90 598 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 CEP152O94986 1710 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 EIF2AK4Q9P2K8 1649 aaKnown RBP8.53□□□□□ -1.04
AP3S1-202ENST00000395548 ADAMTS13Q76LX8 1427 aa8.53□□□□□ -1.04
AP3S1-202ENST00000395548 LRRIQ1Q96JM4 1722 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 MAP3K5Q99683 1374 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 ELOAQ14241 798 aaKnown RBP8.52□□□□□ -1.05
AP3S1-202ENST00000395548 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 TNFRSF25Q93038 417 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 CASKIN1Q8WXD9 1431 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 ATP10DQ9P241 1426 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 RREB1Q92766 1687 aa8.52□□□□□ -1.05
AP3S1-202ENST00000395548 KANK1Q14678 1352 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
AP3S1-202ENST00000395548 MSTNO14793 375 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 EPB42P16452 691 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 NUP188Q5SRE5 1749 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 TMEM131LA2VDJ0 1609 aa8.51□□□□□ -1.05
AP3S1-202ENST00000395548 LRPPRCP42704 1394 aaKnown RBP8.5□□□□□ -1.05
AP3S1-202ENST00000395548 MYOM1P52179 1685 aa8.5□□□□□ -1.05
AP3S1-202ENST00000395548 COL8A1P27658 744 aa8.5□□□□□ -1.05
AP3S1-202ENST00000395548 MDFIQ99750 246 aa8.5□□□□□ -1.05
AP3S1-202ENST00000395548 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
AP3S1-202ENST00000395548 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
AP3S1-202ENST00000395548 ABCC5O15440 1437 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 PTPRUQ92729 1446 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 RAB44Q7Z6P3 723 aaPredicted RBP8.49□□□□□ -1.05
AP3S1-202ENST00000395548 BHMTQ93088 406 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
AP3S1-202ENST00000395548 MTFR1LQ9H019 292 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 NEXMIFQ5QGS0 1516 aa8.49□□□□□ -1.05
AP3S1-202ENST00000395548 KRBA1A5PL33 1030 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 ADH7P40394 386 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 DGKZQ13574 1117 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 MYO19Q96H55 970 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 PNMA5Q96PV4 448 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 DMGDHQ9UI17 866 aaKnown RBP8.48□□□□□ -1.05
AP3S1-202ENST00000395548 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 ADGRL2O95490 1459 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 NWD2Q9ULI1 1742 aa8.48□□□□□ -1.05
AP3S1-202ENST00000395548 PCNTO95613 3336 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms