RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 EYA3Q99504 573 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 RTFDC1Q9BY42 306 aaPredicted RBP18.2■□□□□ 0.5
SCAF11-204ENST00000395454 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
SCAF11-204ENST00000395454 ST18O60284 1047 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 ZC3H12CQ9C0D7 883 aaKnown RBP18.19■□□□□ 0.5
SCAF11-204ENST00000395454 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
SCAF11-204ENST00000395454 PALD1Q9ULE6 856 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 NFKBIEO00221 500 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 GYG1P46976 350 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 CAVIN4Q5BKX8 364 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 HAUS7Q99871 368 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
SCAF11-204ENST00000395454 RASSF7Q02833 373 aa18.18■□□□□ 0.5
SCAF11-204ENST00000395454 KCNB2Q92953 911 aa18.18■□□□□ 0.5
SCAF11-204ENST00000395454 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 AOC3Q16853 763 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 CWC27Q6UX04 472 aaKnown RBP18.17■□□□□ 0.5
SCAF11-204ENST00000395454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCAF11-204ENST00000395454 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 ARAP2Q8WZ64 1704 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 MCM2P49736 904 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 BCAMP50895 628 aa18.17■□□□□ 0.5
SCAF11-204ENST00000395454 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
SCAF11-204ENST00000395454 CCDC102BQ68D86 513 aa18.16■□□□□ 0.5
SCAF11-204ENST00000395454 FAM84BQ96KN1 310 aaPredicted RBP18.16■□□□□ 0.5
SCAF11-204ENST00000395454 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
SCAF11-204ENST00000395454 G3V3G9 751 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 HIBADHP31937 336 aaKnown RBP18.15■□□□□ 0.5
SCAF11-204ENST00000395454 PHKA1P46020 1223 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 KIAA2012Q0VF49 1180 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
SCAF11-204ENST00000395454 ZNF804AQ7Z570 1209 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 IARSP41252 1262 aaKnown RBP18.15■□□□□ 0.5
SCAF11-204ENST00000395454 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
SCAF11-204ENST00000395454 GRIN3BO60391 1043 aa18.14■□□□□ 0.49
SCAF11-204ENST00000395454 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
SCAF11-204ENST00000395454 TTC39AQ5SRH9 613 aa18.14■□□□□ 0.49
SCAF11-204ENST00000395454 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
SCAF11-204ENST00000395454 DBNDD1Q9H9R9 158 aa18.14■□□□□ 0.49
SCAF11-204ENST00000395454 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
SCAF11-204ENST00000395454 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
SCAF11-204ENST00000395454 NMIQ13287 307 aaPredicted RBP18.13■□□□□ 0.49
SCAF11-204ENST00000395454 FBXO33Q7Z6M2 555 aa18.13■□□□□ 0.49
SCAF11-204ENST00000395454 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
SCAF11-204ENST00000395454 VPS33BQ9H267 617 aa18.13■□□□□ 0.49
SCAF11-204ENST00000395454 CD209Q9NNX6 404 aa18.13■□□□□ 0.49
SCAF11-204ENST00000395454 GNL3LQ9NVN8 582 aaKnown RBP18.13■□□□□ 0.49
SCAF11-204ENST00000395454 A0A0D9SFI3 127 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 COA1Q9GZY4 146 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 SNX14Q9Y5W7 946 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 AKAP11Q9UKA4 1901 aa18.12■□□□□ 0.49
SCAF11-204ENST00000395454 PRELPP51888 382 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 NEK4P51957 841 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 NECTIN1Q15223 517 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 SPRYD3Q8NCJ5 442 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 JDP2Q8WYK2 163 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 ECE2O60344 883 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 LMNB1P20700 586 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 PTH1RQ03431 593 aa18.11■□□□□ 0.49
SCAF11-204ENST00000395454 UQCRFS1P1P0C7P4 283 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 ARID4AP29374 1257 aaPredicted RBP18.1■□□□□ 0.49
SCAF11-204ENST00000395454 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 NIM1KQ8IY84 436 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 SBF1O95248 1867 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 MYH7P12883 1935 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 CHD4Q14839 1912 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 COL4A5P29400 1685 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 IL1R1P14778 569 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 MCAMP43121 646 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 CUL4AQ13619 759 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 SCARF1Q14162 830 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 PI16Q6UXB8 463 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 PODNQ7Z5L7 613 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 EDC3Q96F86 508 aaKnown RBP18.1■□□□□ 0.49
SCAF11-204ENST00000395454 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
SCAF11-204ENST00000395454 JAG2Q9Y219 1238 aa18.1■□□□□ 0.49
SCAF11-204ENST00000395454 TDRD7Q8NHU6 1098 aaKnown RBP18.09■□□□□ 0.49
SCAF11-204ENST00000395454 TTC14Q96N46 770 aa18.09■□□□□ 0.49
SCAF11-204ENST00000395454 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
SCAF11-204ENST00000395454 PAG1Q9NWQ8 432 aa18.09■□□□□ 0.49
SCAF11-204ENST00000395454 NDUFB9Q9Y6M9 179 aa18.09■□□□□ 0.49
SCAF11-204ENST00000395454 HSP90AA1P07900 732 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms