RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 TNNT1P13805 278 aa24.09■■□□□ 1.45
CLK3-202ENST00000395066 FAM160A1Q05DH4 1040 aa24.09■■□□□ 1.45
CLK3-202ENST00000395066 ZNF396Q96N95 335 aaPredicted RBP24.09■■□□□ 1.45
CLK3-202ENST00000395066 ZAP70P43403 619 aa24.09■■□□□ 1.45
CLK3-202ENST00000395066 NAA30Q147X3 362 aaPredicted RBP24.09■■□□□ 1.45
CLK3-202ENST00000395066 SYCP1Q15431 976 aa24.09■■□□□ 1.45
CLK3-202ENST00000395066 AOPEPQ8N6M6 819 aa24.09■■□□□ 1.45
CLK3-202ENST00000395066 ZNF274Q96GC6 653 aaPredicted RBP24.09■■□□□ 1.45
CLK3-202ENST00000395066 FGAP02671 866 aa24.08■■□□□ 1.45
CLK3-202ENST00000395066 CCDC57Q2TAC2 916 aa24.08■■□□□ 1.45
CLK3-202ENST00000395066 NKX2-3Q8TAU0 364 aa24.08■■□□□ 1.45
CLK3-202ENST00000395066 TNS3Q68CZ2 1445 aa24.08■■□□□ 1.45
CLK3-202ENST00000395066 NUP188Q5SRE5 1749 aa24.08■■□□□ 1.45
CLK3-202ENST00000395066 ZNF592Q92610 1267 aa24.08■■□□□ 1.44
CLK3-202ENST00000395066 KLF18A0A0U1RQI7 1052 aa24.07■■□□□ 1.44
CLK3-202ENST00000395066 NDUFA8P51970 172 aa24.07■■□□□ 1.44
CLK3-202ENST00000395066 TPD52L1Q16890 204 aaPredicted RBP24.07■■□□□ 1.44
CLK3-202ENST00000395066 FEZ1Q99689 392 aa24.07■■□□□ 1.44
CLK3-202ENST00000395066 GOLGA8BA8MQT2 603 aa24.07■■□□□ 1.44
CLK3-202ENST00000395066 PRC1O43663 620 aa24.07■■□□□ 1.44
CLK3-202ENST00000395066 NWD2Q9ULI1 1742 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 LRRC8AQ8IWT6 810 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 PRDM11Q9NQV5 511 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 PAXBP1Q9Y5B6 917 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 CCDC158Q5M9N0 1113 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 SDF4Q9BRK5 362 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 SPATA31A3Q5VYP0 1347 aa24.06■■□□□ 1.44
CLK3-202ENST00000395066 ANTXR2P58335 489 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 HPS5Q9UPZ3 1129 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 PCDH11XQ9BZA7 1347 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 PCDH11YQ9BZA8 1340 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 CTAGE5O15320 804 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 CAVIN2O95810 425 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 CDC25BP30305 580 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 FMR1NBQ8N0W7 255 aaPredicted RBP24.05■■□□□ 1.44
CLK3-202ENST00000395066 C8orf76Q96K31 380 aa24.05■■□□□ 1.44
CLK3-202ENST00000395066 KIF28PB7ZC32 967 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 BIN1O00499 593 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 CIAO1O76071 339 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 RXRAP19793 462 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 IMMTQ16891 758 aaKnown RBP24.04■■□□□ 1.44
CLK3-202ENST00000395066 MRPS27Q92552 414 aaKnown RBP24.04■■□□□ 1.44
CLK3-202ENST00000395066 AIFM3Q96NN9 605 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 KCPQ6ZWJ8 1503 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 KIF20AO95235 890 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 SF3A1Q15459 793 aaKnown RBP24.04■■□□□ 1.44
CLK3-202ENST00000395066 TAF7LQ5H9L4 462 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 CCDC112Q8NEF3 446 aa24.04■■□□□ 1.44
CLK3-202ENST00000395066 STK38Q15208 465 aa24.03■■□□□ 1.44
CLK3-202ENST00000395066 DPCR1Q3MIW9 517 aa24.03■■□□□ 1.44
CLK3-202ENST00000395066 SARM1Q6SZW1 724 aa24.03■■□□□ 1.44
CLK3-202ENST00000395066 TRMT1Q9NXH9 659 aaKnown RBP24.03■■□□□ 1.44
CLK3-202ENST00000395066 ORC3Q9UBD5 711 aaPredicted RBP24.03■■□□□ 1.44
CLK3-202ENST00000395066 LINC00301Q8NCQ3 95 aa24.03■■□□□ 1.44
CLK3-202ENST00000395066 ANO10Q9NW15 660 aa24.03■■□□□ 1.44
CLK3-202ENST00000395066 ISM2Q6H9L7 571 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 MB21D2Q8IYB1 491 aaPredicted RBP24.02■■□□□ 1.44
CLK3-202ENST00000395066 STRN4Q9NRL3 753 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 OGFRQ9NZT2 677 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 GPTP24298 496 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 MRFAP1L1Q96HT8 127 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 RTEL1Q9NZ71 1219 aa24.02■■□□□ 1.44
CLK3-202ENST00000395066 CCDC69A6NI79 296 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 GPAA1O43292 621 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 SKILP12757 684 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 ISCA1Q9BUE6 129 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 CEP57L1Q8IYX8 460 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 CTNNA3Q9UI47 895 aa24.01■■□□□ 1.43
CLK3-202ENST00000395066 WDR17Q8IZU2 1322 aa24■■□□□ 1.43
CLK3-202ENST00000395066 TCIRG1Q13488 830 aa24■■□□□ 1.43
CLK3-202ENST00000395066 ADALQ6DHV7 355 aa24■■□□□ 1.43
CLK3-202ENST00000395066 STRCP1A6NGW2 1772 aa24■■□□□ 1.43
CLK3-202ENST00000395066 ERVV-2B6SEH9 535 aa24■■□□□ 1.43
CLK3-202ENST00000395066 CPLX1O14810 134 aa24■■□□□ 1.43
CLK3-202ENST00000395066 FBXO18Q8NFZ0 1043 aa24■■□□□ 1.43
CLK3-202ENST00000395066 CGNQ9P2M7 1197 aaKnown RBP24■■□□□ 1.43
CLK3-202ENST00000395066 ABCC6O95255 1503 aa24■■□□□ 1.43
CLK3-202ENST00000395066 MARCKSP29966 332 aaPredicted RBP23.99■■□□□ 1.43
CLK3-202ENST00000395066 NBPF3Q9H094 633 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 NEDD4P46934 1319 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 MCAMP43121 646 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 EVCP57679 992 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 CEP135Q66GS9 1140 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 RALYLQ86SE5 291 aaKnown RBP23.99■■□□□ 1.43
CLK3-202ENST00000395066 APPBP2Q92624 585 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 SENP2Q9HC62 589 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
CLK3-202ENST00000395066 ZNF213O14771 459 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 CCZ1BP86790 482 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 CCZ1P86791 482 aaPredicted RBP23.98■■□□□ 1.43
CLK3-202ENST00000395066 MYSM1Q5VVJ2 828 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 ATL3Q6DD88 541 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 DNAJC10Q8IXB1 793 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 SPTLC2O15270 562 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 NBPF11Q86T75 865 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 UBR2Q8IWV8 1755 aa23.98■■□□□ 1.43
CLK3-202ENST00000395066 IFIT5Q13325 482 aaKnown RBP23.97■■□□□ 1.43
CLK3-202ENST00000395066 NCOA7Q8NI08 942 aa23.97■■□□□ 1.43
CLK3-202ENST00000395066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.97■■□□□ 1.43
CLK3-202ENST00000395066 INCENPQ9NQS7 918 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms