RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 A0A087WZG4 1122 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 FANCGO15287 622 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 ZNF202O95125 648 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
CLIP2-203ENST00000395060 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
CLIP2-203ENST00000395060 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 SYNE3Q6ZMZ3 975 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
CLIP2-203ENST00000395060 ATP5JP18859 108 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 UBASH3AP57075 661 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 LMBR1LQ6UX01 489 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 CPLX1O14810 134 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 SPTLC2O15270 562 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
CLIP2-203ENST00000395060 PNOCQ13519 176 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-203ENST00000395060 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-203ENST00000395060 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-203ENST00000395060 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 KIF28PB7ZC32 967 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 NRDCO43847 1150 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
CLIP2-203ENST00000395060 TAF3Q5VWG9 929 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
CLIP2-203ENST00000395060 GOLGA8BA8MQT2 603 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 LINC00301Q8NCQ3 95 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 DESI2Q9BSY9 194 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLIP2-203ENST00000395060 DENND2AQ9ULE3 1009 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 HSPD1P10809 573 aaKnown RBP16.58■□□□□ 0.24
CLIP2-203ENST00000395060 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
CLIP2-203ENST00000395060 EVCP57679 992 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
CLIP2-203ENST00000395060 HOXB7P09629 217 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 PFKFB1P16118 471 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 ETF1P62495 437 aaKnown RBP16.57■□□□□ 0.24
CLIP2-203ENST00000395060 PDIA6Q15084 440 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 CAPN2P17655 700 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 GNG11P61952 73 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 TPM4P67936 248 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
CLIP2-203ENST00000395060 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
CLIP2-203ENST00000395060 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 ADKP55263 362 aaKnown RBP16.56■□□□□ 0.24
CLIP2-203ENST00000395060 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 ADALQ6DHV7 355 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-203ENST00000395060 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
CLIP2-203ENST00000395060 ANKRD13DQ6ZTN6 518 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 ATF3P18847 181 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 WDR24Q96S15 920 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 MROH7-TTC4A0A0A0MT08 1334 aa16.56■□□□□ 0.24
CLIP2-203ENST00000395060 PXDNQ92626 1479 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 FOXN1O15353 648 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 SASH3O75995 380 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 HSPA2P54652 639 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 NCAPHQ15003 741 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 TRMT44Q8IYL2 757 aaKnown RBP16.55■□□□□ 0.24
CLIP2-203ENST00000395060 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
CLIP2-203ENST00000395060 FANCLQ9NW38 375 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 M0R2C6 588 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
CLIP2-203ENST00000395060 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 CALCOCO1Q9P1Z2 691 aa16.55■□□□□ 0.24
CLIP2-203ENST00000395060 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 PHKBQ93100 1093 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 HAUS7Q99871 368 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 ARGLU1Q9NWB6 273 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 KIF2AO00139 706 aaPredicted RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 TFRCP02786 760 aaKnown RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 MYSM1Q5VVJ2 828 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
CLIP2-203ENST00000395060 CYP2C19P33261 490 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 SYKP43405 635 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
CLIP2-203ENST00000395060 C19orf44Q9H6X5 657 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms