RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.79□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 RNF181Q9P0P0 153 aa14.79□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 PDS5AQ29RF7 1337 aaKnown RBP14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 ATP5JP18859 108 aa14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 PDE1AP54750 535 aa14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 EIF6P56537 245 aaKnown RBP14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 STAP2Q9UGK3 403 aa14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 DICER1Q9UPY3 1922 aaKnown RBP14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 SBF1O95248 1867 aa14.78□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 ZC3H4Q9UPT8 1303 aaKnown RBP14.77□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 MYH13Q9UKX3 1938 aa14.77□□□□□ -0.04
GTF2IRD2B-201ENST00000394939 TNIP1Q15025 636 aa14.77□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 C9orf131Q5VYM1 1079 aa14.77□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 TBC1D22AQ8WUA7 517 aa14.77□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 FBXW7Q969H0 707 aa14.77□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 IQSEC3Q9UPP2 1182 aaPredicted RBP14.77□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 USP17L3A6NCW0 530 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 USP17L4A6NCW7 530 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 RASGRF1Q13972 1273 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 TTLL5Q6EMB2 1281 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 USP17L1Q7RTZ2 530 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 ZGPATQ8N5A5 531 aaKnown RBP14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SPATA5Q8NB90 893 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 OTUD7AQ8TE49 926 aaPredicted RBP14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 OSBPL3Q9H4L5 887 aa14.76□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 FAM205AQ6ZU69 1335 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 FZD9O00144 591 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PDE4AP27815 886 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 MCAMP43121 646 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 TTF1Q15361 905 aaPredicted RBP14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 STRIP1Q5VSL9 837 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 BOLA2Q9H3K6 86 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 HMG20BQ9P0W2 317 aa14.75□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 MYO3BQ8WXR4 1341 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 RGS3P49796 1198 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PRELPP51888 382 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 GTF2IP78347 998 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SPTY2D1Q68D10 685 aaPredicted RBP14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 CIAPIN1Q6FI81 312 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 DNAJC2Q99543 621 aaKnown RBP14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 HAUS7Q99871 368 aa14.74□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 YDJCA8MPS7 323 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 IGSF3O75054 1194 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 RAD17O75943 681 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 FKBP1AP62942 108 aaKnown RBP14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 LRRFIP1Q32MZ4 808 aaKnown RBP14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 TSHZ3Q63HK5 1081 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 DPY19L2Q6NUT2 758 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PI4K2BQ8TCG2 481 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SNRKQ9NRH2 765 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PAG1Q9NWQ8 432 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 COL4A5P29400 1685 aa14.73□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SALL1Q9NSC2 1324 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 ZAP70P43403 619 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 CXCL9Q07325 125 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SCARF1Q14162 830 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 MFSD14BQ5SR56 506 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SUGT1Q9Y2Z0 365 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PSME4Q14997 1843 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 MAST3O60307 1309 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 GOLIM4O00461 696 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 PSMD14O00487 310 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 VIL1P09327 827 aaKnown RBP14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 RPS12P25398 132 aaKnown RBP14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 DACT2Q5SW24 774 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 CNTROBQ8N137 903 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 GPC2Q8N158 579 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 LRP2BPQ9P2M1 347 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 ABCF2Q9UG63 623 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 JAG2Q9Y219 1238 aa14.71□□□□□ -0.05
GTF2IRD2B-201ENST00000394939 SCN9AQ15858 1988 aa14.71□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 COL1A1P02452 1464 aaPredicted RBP14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 LDHBP07195 334 aaKnown RBP14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 MMP14P50281 582 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 MAP3K12Q12852 859 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 TTC22Q5TAA0 569 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 TMED8Q6PL24 325 aaPredicted RBP14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 PI16Q6UXB8 463 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 AGBL3Q8NEM8 1001 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 EVI5LQ96CN4 794 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 KCNQ5Q9NR82 932 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 GJA3Q9Y6H8 435 aa14.7□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 ZNF541Q9H0D2 1346 aa14.69□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 CYP2E1P05181 493 aaPredicted RBP14.69□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 ZSCAN25Q6NSZ9 544 aa14.69□□□□□ -0.06
GTF2IRD2B-201ENST00000394939 TICAM2Q86XR7 235 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms