RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TIGD1Q96MW7 591 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 AXIN2Q9Y2T1 843 aa11.68□□□□□ -0.54
UBE2D3-208ENST00000394803 CDKL5O76039 1030 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 SLU7O95391 586 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.543e-9■■■□□ 15
UBE2D3-208ENST00000394803 COL9A3Q14050 684 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 ZNF592Q92610 1267 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 MAST3O60307 1309 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 CPLX1O14810 134 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 IKBKBO14920 756 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■□□□□ 10.5
UBE2D3-208ENST00000394803 NLRP12P59046 1061 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 CCZ1BP86790 482 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 CCZ1P86791 482 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 FOXO4P98177 505 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 FILIP1Q7Z7B0 1213 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 LINC00301Q8NCQ3 95 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 LRRC2Q9BYS8 371 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 MORC2Q9Y6X9 1032 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-208ENST00000394803 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 SPTLC2O15270 562 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 CSB-PGBD3P0DP91 1061 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 NUP188Q5SRE5 1749 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 MEGF6O75095 1541 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 CMA1P23946 247 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 GORABQ5T7V8 394 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 FBXO18Q8NFZ0 1043 aa11.66□□□□□ -0.54
UBE2D3-208ENST00000394803 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■□□□ 13.5
UBE2D3-208ENST00000394803 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 TRDNQ13061 729 aa11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 NOL10Q9BSC4 688 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 HOOK1Q9UJC3 728 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-208ENST00000394803 A0A1B0GUL7 405 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 SMC2O95347 1197 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 SRRTQ9BXP5 876 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 ORC3Q9UBD5 711 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 COL18A1P39060 1754 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 TJP1Q07157 1748 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 PRC1O43663 620 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 TPM1P09493 284 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 APPBP2Q92624 585 aa11.64□□□□□ -0.55
UBE2D3-208ENST00000394803 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 PPP6R2O75170 966 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 NDUFA8P51970 172 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 FOSBP53539 338 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 C19orf44Q9H6X5 657 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 NCOA5Q9HCD5 579 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ARGLU1Q9NWB6 273 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 A0A1B0GVL5 298 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 GOLGA6L9A6NEM1 432 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ZNF213O14771 459 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ZNF202O95125 648 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 FDPSP14324 419 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ZC3H6P61129 1189 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 RBM33Q96EV2 1170 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 L2HGDHQ9H9P8 463 aa11.63□□□□□ -0.55
UBE2D3-208ENST00000394803 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 DCCP43146 1447 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 ERVV-2B6SEH9 535 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 TIMM10P62072 90 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 GUCY1B3Q02153 619 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 TTF1Q15361 905 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.558e-9■□□□□ 8.1
UBE2D3-208ENST00000394803 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
UBE2D3-208ENST00000394803 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms