RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 HMGB1P09429 215 aaKnown RBP18.22■□□□□ 0.51
PTBP1-204ENST00000394601 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
PTBP1-204ENST00000394601 SPATA32Q96LK8 384 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 TRIM5Q9C035 493 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 PLCH1Q4KWH8 1693 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 LRP5O75197 1615 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
PTBP1-204ENST00000394601 LUZP1Q86V48 1076 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 FAM89AQ96GI7 184 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-204ENST00000394601 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
PTBP1-204ENST00000394601 PDIA3P30101 505 aaKnown RBP18.2■□□□□ 0.5
PTBP1-204ENST00000394601 HLFQ16534 295 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 CCDC112Q8NEF3 446 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 NCBP1Q09161 790 aaKnown RBP18.2■□□□□ 0.5
PTBP1-204ENST00000394601 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
PTBP1-204ENST00000394601 CLSTN2Q9H4D0 955 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 RIPOR2Q9Y4F9 1068 aa18.2■□□□□ 0.5
PTBP1-204ENST00000394601 ARAP2Q8WZ64 1704 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 TYRO3Q06418 890 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 VGLL2Q8N8G2 317 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 NKX2-3Q8TAU0 364 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 NUP62CLQ9H1M0 184 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
PTBP1-204ENST00000394601 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
PTBP1-204ENST00000394601 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
PTBP1-204ENST00000394601 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 GTF2F1P35269 517 aaKnown RBP eCLIP18.18■□□□□ 0.53e-7■■■■□ 21.2
PTBP1-204ENST00000394601 MAP3K11Q16584 847 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 PI16Q6UXB8 463 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 ZSCAN16Q9H4T2 348 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 GPHNQ9NQX3 736 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 ZNF274Q96GC6 653 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 PUS7LQ9H0K6 701 aaKnown RBP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 BCL9O00512 1426 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 POLR3GO15318 223 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-204ENST00000394601 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 NBPF3Q9H094 633 aa18.18■□□□□ 0.5
PTBP1-204ENST00000394601 ABCC12Q96J65 1359 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 FAM200AQ8TCP9 573 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 OGFRQ9NZT2 677 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 RCOR1Q9UKL0 485 aa18.17■□□□□ 0.5
PTBP1-204ENST00000394601 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 SNW1Q13573 536 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 ZAP70P43403 619 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 ANTXR2P58335 489 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 NLRP10Q86W26 655 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 GOLPH3LQ9H4A5 285 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 DDX19AQ9NUU7 478 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 HPS5Q9UPZ3 1129 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 ATRNO75882 1429 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 FGAP02671 866 aa18.16■□□□□ 0.5
PTBP1-204ENST00000394601 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 IPO4Q8TEX9 1081 aaKnown RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
PTBP1-204ENST00000394601 ECM29Q5VYK3 1845 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 MCAMP43121 646 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■□□ 19
PTBP1-204ENST00000394601 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 DOCK2Q92608 1830 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 GOLGA6L4A6NEF3 574 aa18.15■□□□□ 0.5
PTBP1-204ENST00000394601 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
PTBP1-204ENST00000394601 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 GREM2Q9H772 168 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 ANO6Q4KMQ2 910 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 TIGD1Q96MW7 591 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
PTBP1-204ENST00000394601 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
PTBP1-204ENST00000394601 USP28Q96RU2 1077 aa18.14■□□□□ 0.49
PTBP1-204ENST00000394601 FOSBP53539 338 aa18.13■□□□□ 0.49
PTBP1-204ENST00000394601 TEX13AQ9BXU3 409 aaPredicted RBP18.13■□□□□ 0.49
PTBP1-204ENST00000394601 A0A087WWV3 80 aa18.13■□□□□ 0.49
PTBP1-204ENST00000394601 CCDC66A2RUB6 948 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms