RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 H7C1W4 665 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 SPTLC2O15270 562 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 CTAGE5O15320 804 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 PCDHA7Q9UN72 937 aa12.27□□□□□ -0.45
ACTN1-203ENST00000394419 CCDC69A6NI79 296 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 STARD3NLO95772 234 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 SERPINC1P01008 464 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 IL2RBP14784 551 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 PTPN21Q16825 1174 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 RABL6Q3YEC7 729 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-203ENST00000394419 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 LLPHQ9BRT6 129 aaKnown RBP12.26□□□□□ -0.45
ACTN1-203ENST00000394419 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 B4E1Z4 1266 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 SNAP23O00161 211 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 METAP2P50579 478 aaKnown RBP eCLIP12.26□□□□□ -0.452e-6■■■□□ 17.8
ACTN1-203ENST00000394419 NDUFA8P51970 172 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 CCDC144BQ3MJ40 725 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 PDILTQ8N807 584 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 ZKSCAN3Q9BRR0 538 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 ALG1Q9BT22 464 aa12.26□□□□□ -0.45
ACTN1-203ENST00000394419 KDM6AO15550 1401 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 NAA30Q147X3 362 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 NAA16Q6N069 864 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 ITGA6P23229 1130 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.451e-13■■■□□ 15
ACTN1-203ENST00000394419 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 AEBP2Q6ZN18 517 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 INCENPQ9NQS7 918 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■□□ 15.2
ACTN1-203ENST00000394419 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 ZHX1Q9UKY1 873 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 CDK11BP21127 795 aaKnown RBP12.25□□□□□ -0.45
ACTN1-203ENST00000394419 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
ACTN1-203ENST00000394419 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 TDO2P48775 406 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 SLC26A6Q9BXS9 759 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 RCOR1Q9UKL0 485 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 LTN1O94822 1766 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 IFIT3O14879 490 aaKnown RBP12.24□□□□□ -0.45
ACTN1-203ENST00000394419 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 NAPBQ9H115 298 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 TMX1Q9H3N1 280 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 MEGF6O75095 1541 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 TMEM67Q5HYA8 995 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
ACTN1-203ENST00000394419 GREM2Q9H772 168 aa12.24□□□□□ -0.45
ACTN1-203ENST00000394419 CARMIL3Q8ND23 1372 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 APPBP2Q92624 585 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 ZFYP08048 801 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.457e-7■■■■□ 21
ACTN1-203ENST00000394419 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 SYKP43405 635 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 DPCR1Q3MIW9 517 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 KCNG4Q8TDN1 519 aa12.23□□□□□ -0.45
ACTN1-203ENST00000394419 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-203ENST00000394419 KIF13AQ9H1H9 1805 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 ERICH2A1L162 156 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 ZNF202O95125 648 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 OLFM4Q6UX06 510 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
ACTN1-203ENST00000394419 MIGA1Q8NAN2 632 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 SMARCC2Q8TAQ2 1214 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 LRP2BPQ9P2M1 347 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
ACTN1-203ENST00000394419 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 NFAT5O94916 1531 aa12.22□□□□□ -0.45
ACTN1-203ENST00000394419 ZBTB43O43298 467 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 CAVIN2O95810 425 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
ACTN1-203ENST00000394419 CTDSPL2Q05D32 466 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 HLFQ16534 295 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 USP27XA6NNY8 438 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
ACTN1-203ENST00000394419 FBXO18Q8NFZ0 1043 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms