RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MAP4K1Q92918 833 aa21.85■■□□□ 1.09
HOXC6-202ENST00000394331 LARP6Q9BRS8 491 aaKnown RBP21.84■■□□□ 1.09
HOXC6-202ENST00000394331 FUT8Q9BYC5 575 aa21.84■■□□□ 1.09
HOXC6-202ENST00000394331 DEF6Q9H4E7 631 aa21.84■■□□□ 1.09
HOXC6-202ENST00000394331 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
HOXC6-202ENST00000394331 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
HOXC6-202ENST00000394331 LMAN1P49257 510 aa21.84■■□□□ 1.09
HOXC6-202ENST00000394331 ADCK5Q3MIX3 580 aa21.84■■□□□ 1.09
HOXC6-202ENST00000394331 CPA1P15085 419 aa21.83■■□□□ 1.09
HOXC6-202ENST00000394331 PSMA5P28066 241 aa21.83■■□□□ 1.09
HOXC6-202ENST00000394331 SNRPA1P09661 255 aaKnown RBP21.83■■□□□ 1.09
HOXC6-202ENST00000394331 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
HOXC6-202ENST00000394331 CREB3L3Q68CJ9 461 aa21.83■■□□□ 1.09
HOXC6-202ENST00000394331 CHMP4CQ96CF2 233 aa21.83■■□□□ 1.09
HOXC6-202ENST00000394331 MYD88Q99836 296 aa21.83■■□□□ 1.09
HOXC6-202ENST00000394331 SFPQP23246 707 aaKnown RBP eCLIP21.83■■□□□ 1.08
HOXC6-202ENST00000394331 ANKRD13DQ6ZTN6 518 aa21.83■■□□□ 1.08
HOXC6-202ENST00000394331 TTC5Q8N0Z6 440 aa21.83■■□□□ 1.08
HOXC6-202ENST00000394331 ZNF496Q96IT1 587 aaPredicted RBP21.83■■□□□ 1.08
HOXC6-202ENST00000394331 NAT10Q9H0A0 1025 aaKnown RBP21.83■■□□□ 1.08
HOXC6-202ENST00000394331 SIL1Q9H173 461 aa21.83■■□□□ 1.08
HOXC6-202ENST00000394331 ALDH8A1Q9H2A2 487 aaPredicted RBP21.83■■□□□ 1.08
HOXC6-202ENST00000394331 EVCP57679 992 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 CEP57L1Q8IYX8 460 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 FAM227BQ96M60 508 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 MAP2K7O14733 419 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 ATF3P18847 181 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 GSCP56915 257 aaPredicted RBP21.82■■□□□ 1.08
HOXC6-202ENST00000394331 ARMCX5Q6P1M9 558 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 TRIM65Q6PJ69 517 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 CCDC91Q7Z6B0 441 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 FSD1Q9BTV5 496 aa21.82■■□□□ 1.08
HOXC6-202ENST00000394331 CSB-PGBD3P0DP91 1061 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 CORO7P57737 925 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 FERMT3Q86UX7 667 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 BOLA2Q9H3K6 86 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.81■■□□□ 1.08
HOXC6-202ENST00000394331 ABCC6O95255 1503 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 RSRC2Q7L4I2 434 aaKnown RBP21.81■■□□□ 1.08
HOXC6-202ENST00000394331 FCHSD1Q86WN1 690 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 BPIFA3Q9BQP9 254 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 MYH15Q9Y2K3 1946 aa21.81■■□□□ 1.08
HOXC6-202ENST00000394331 FAM173BQ6P4H8 233 aa21.8■■□□□ 1.08
HOXC6-202ENST00000394331 RABGGTAQ92696 567 aa21.8■■□□□ 1.08
HOXC6-202ENST00000394331 ALS2Q96Q42 1657 aa21.8■■□□□ 1.08
HOXC6-202ENST00000394331 EIF3CLB5ME19 914 aaKnown RBP21.8■■□□□ 1.08
HOXC6-202ENST00000394331 EIF3CQ99613 913 aaKnown RBP21.8■■□□□ 1.08
HOXC6-202ENST00000394331 TLR7Q9NYK1 1049 aaKnown RBP21.8■■□□□ 1.08
HOXC6-202ENST00000394331 CCDC151A5D8V7 595 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 ANKRD1Q15327 319 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 MPHOSPH8Q99549 860 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 CFAP45Q9UL16 551 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 SMC2O95347 1197 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 CCDC172P0C7W6 258 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 CEP89Q96ST8 783 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 CARD6Q9BX69 1037 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 TPCN1Q9ULQ1 816 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 CEP83Q9Y592 693 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 RGPD5Q99666 1765 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 SLC27A2O14975 620 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 MRC1P22897 1456 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 BRD3Q15059 726 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
HOXC6-202ENST00000394331 MEGF6O75095 1541 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 APPP05067 770 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 EPHA10Q5JZY3 1008 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 LRP10Q7Z4F1 713 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 ZSCAN16Q9H4T2 348 aaPredicted RBP21.78■■□□□ 1.08
HOXC6-202ENST00000394331 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
HOXC6-202ENST00000394331 COL15A1P39059 1388 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
HOXC6-202ENST00000394331 HNRNPLLQ8WVV9 542 aaKnown RBP21.78■■□□□ 1.08
HOXC6-202ENST00000394331 CCDC34Q96HJ3 373 aa21.77■■□□□ 1.08
HOXC6-202ENST00000394331 A0A0D9SFI3 127 aa21.77■■□□□ 1.08
HOXC6-202ENST00000394331 MCTP2Q6DN12 878 aa21.77■■□□□ 1.08
HOXC6-202ENST00000394331 NECAB1Q8N987 351 aa21.77■■□□□ 1.08
HOXC6-202ENST00000394331 HMG20BQ9P0W2 317 aa21.77■■□□□ 1.08
HOXC6-202ENST00000394331 MED23Q9ULK4 1368 aa21.77■■□□□ 1.07
HOXC6-202ENST00000394331 H3BQF6 201 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 RESTQ13127 1097 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 EFCAB13Q8IY85 973 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 DRC1Q96MC2 740 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 KIF1CO43896 1103 aaKnown RBP21.76■■□□□ 1.07
HOXC6-202ENST00000394331 ATP5JP18859 108 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 GORABQ5T7V8 394 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 BLOC1S2Q6QNY1 142 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 MMS22LQ6ZRQ5 1243 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 URI1O94763 535 aaPredicted RBP21.76■■□□□ 1.07
HOXC6-202ENST00000394331 MAP3K9P80192 1104 aa21.76■■□□□ 1.07
HOXC6-202ENST00000394331 RABL6Q3YEC7 729 aaPredicted RBP21.76■■□□□ 1.07
HOXC6-202ENST00000394331 C5P01031 1676 aa21.75■■□□□ 1.07
HOXC6-202ENST00000394331 RPAINQ86UA6 219 aa21.75■■□□□ 1.07
HOXC6-202ENST00000394331 AOPEPQ8N6M6 819 aa21.75■■□□□ 1.07
HOXC6-202ENST00000394331 DONSONQ9NYP3 566 aa21.75■■□□□ 1.07
HOXC6-202ENST00000394331 CYP27B1O15528 508 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms