RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 GREM2Q9H772 168 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 RIPOR2Q9Y4F9 1068 aa8.48□□□□□ -1.05
SMAD1-202ENST00000394092 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
SMAD1-202ENST00000394092 M0R2C6 588 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 DHX16O60231 1041 aaKnown RBP8.47□□□□□ -1.05
SMAD1-202ENST00000394092 ADORA1P30542 326 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 MCM5P33992 734 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 ZAP70P43403 619 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 EXOSC10Q01780 885 aaKnown RBP8.47□□□□□ -1.05
SMAD1-202ENST00000394092 PUM3Q15397 648 aaKnown RBP8.47□□□□□ -1.05
SMAD1-202ENST00000394092 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 STOX1Q6ZVD7 989 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 ZNF34Q8IZ26 560 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 CCDC87Q9NVE4 849 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 CFAP45Q9UL16 551 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
SMAD1-202ENST00000394092 PDE8BO95263 885 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 SLC5A1P13866 664 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.05
SMAD1-202ENST00000394092 SCRN1Q12765 414 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 RALYLQ86SE5 291 aaKnown RBP8.46□□□□□ -1.05
SMAD1-202ENST00000394092 TTC6Q86TZ1 520 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 FERMT3Q86UX7 667 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 VGLL2Q8N8G2 317 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 NCOA7Q8NI08 942 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 LPIN2Q92539 896 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 SMARCC1Q92922 1105 aaPredicted RBP8.46□□□□□ -1.05
SMAD1-202ENST00000394092 OSBP2Q969R2 916 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 CCDC85AQ96PX6 553 aaPredicted RBP8.46□□□□□ -1.05
SMAD1-202ENST00000394092 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.05
SMAD1-202ENST00000394092 RTL9Q8NET4 1388 aa8.46□□□□□ -1.05
SMAD1-202ENST00000394092 A0A1B0GUL6 1792 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 CASZ1Q86V15 1759 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 MYH14Q7Z406 1995 aaKnown RBP8.46□□□□□ -1.06
SMAD1-202ENST00000394092 LTBP4Q8N2S1 1624 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 GPAA1O43292 621 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 CHGBP05060 677 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 CCDC192P0DO97 292 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 EIF5P55010 431 aaKnown RBP8.46□□□□□ -1.06
SMAD1-202ENST00000394092 EVCP57679 992 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 TRDNQ13061 729 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 UBE3CQ15386 1083 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 MAP3K11Q16584 847 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 RNF214Q8ND24 703 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 NSUN7Q8NE18 718 aaKnown RBP8.46□□□□□ -1.06
SMAD1-202ENST00000394092 NUP62CLQ9H1M0 184 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 ZNF652Q9Y2D9 606 aa8.46□□□□□ -1.06
SMAD1-202ENST00000394092 ZMYM6O95789 1325 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 C4AP0C0L4 1744 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 C4BP0C0L5 1744 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 ZNF213O14771 459 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 JAK2O60674 1132 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 PTMAP06454 111 aaKnown RBP8.45□□□□□ -1.06
SMAD1-202ENST00000394092 ADD2P35612 726 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 MCAMP43121 646 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 RESTQ13127 1097 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 COL9A3Q14050 684 aaPredicted RBP8.45□□□□□ -1.06
SMAD1-202ENST00000394092 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 ZNF396Q96N95 335 aaPredicted RBP8.45□□□□□ -1.06
SMAD1-202ENST00000394092 MPHOSPH8Q99549 860 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
SMAD1-202ENST00000394092 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 NOL7Q9UMY1 257 aaKnown RBP8.45□□□□□ -1.06
SMAD1-202ENST00000394092 SCN7AQ01118 1682 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 SALL1Q9NSC2 1324 aa8.45□□□□□ -1.06
SMAD1-202ENST00000394092 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 IGHMBP2P38935 993 aaKnown RBP8.44□□□□□ -1.06
SMAD1-202ENST00000394092 CRKLP46109 303 aaKnown RBP8.44□□□□□ -1.06
SMAD1-202ENST00000394092 SCARF1Q14162 830 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 BICD2Q8TD16 824 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 LEO1Q8WVC0 666 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-202ENST00000394092 DDX11Q96FC9 970 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 NAP1L2Q9ULW6 460 aaPredicted RBP8.44□□□□□ -1.06
SMAD1-202ENST00000394092 ZKSCAN5Q9Y2L8 839 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 SLIT2O94813 1529 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 SPATA31A5Q5VU36 1347 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 SPATA31A7Q8IWB4 1347 aa8.44□□□□□ -1.06
SMAD1-202ENST00000394092 CARMIL3Q8ND23 1372 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 MYH13Q9UKX3 1938 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 A0A0G2JS52 829 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 RGL2O15211 777 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 PRC1O43663 620 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 CAVIN2O95810 425 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 FGAP02671 866 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 HCLS1P14317 486 aaPredicted RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 FGFR2P21802 821 aa8.43□□□□□ -1.06
SMAD1-202ENST00000394092 PDIA3P30101 505 aaKnown RBP8.43□□□□□ -1.06
SMAD1-202ENST00000394092 SIK1P57059 783 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms