RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 ATRNO75882 1429 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
CASP3-202ENST00000393585 BRF1Q92994 677 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
CASP3-202ENST00000393585 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 SPATA5Q8NB90 893 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 ONECUT3O60422 494 aaPredicted RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 FGAP02671 866 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 FGD1P98174 961 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
CASP3-202ENST00000393585 TCHHQ07283 1943 aa13.04□□□□□ -0.32
CASP3-202ENST00000393585 LY75O60449 1722 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 PDE6AP16499 860 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 GPT2Q8TD30 523 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 QTRT2Q9H974 415 aaKnown RBP13.03□□□□□ -0.32
CASP3-202ENST00000393585 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 VPS37CA5D8V6 355 aaPredicted RBP13.03□□□□□ -0.32
CASP3-202ENST00000393585 ZSCAN25Q6NSZ9 544 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 CAVIN1Q6NZI2 390 aaKnown RBP13.03□□□□□ -0.32
CASP3-202ENST00000393585 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
CASP3-202ENST00000393585 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
CASP3-202ENST00000393585 NSFL1CQ9UNZ2 370 aaKnown RBP13.03□□□□□ -0.32
CASP3-202ENST00000393585 FSD2A1L4K1 749 aa13.02□□□□□ -0.32
CASP3-202ENST00000393585 F13A1P00488 732 aa13.02□□□□□ -0.33
CASP3-202ENST00000393585 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
CASP3-202ENST00000393585 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.33
CASP3-202ENST00000393585 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
CASP3-202ENST00000393585 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
CASP3-202ENST00000393585 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 EXOSC10Q01780 885 aaKnown RBP13.01□□□□□ -0.33
CASP3-202ENST00000393585 APOBRQ0VD83 1088 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 UBE3CQ15386 1083 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
CASP3-202ENST00000393585 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 JAK2O60674 1132 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 RFC4P35249 363 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 GYG1P46976 350 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
CASP3-202ENST00000393585 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
CASP3-202ENST00000393585 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
CASP3-202ENST00000393585 C4AP0C0L4 1744 aa13□□□□□ -0.33
CASP3-202ENST00000393585 NPHP1O15259 732 aa13□□□□□ -0.33
CASP3-202ENST00000393585 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
CASP3-202ENST00000393585 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
CASP3-202ENST00000393585 MINPP1Q9UNW1 487 aa13□□□□□ -0.33
CASP3-202ENST00000393585 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
CASP3-202ENST00000393585 RGL2O15211 777 aa13□□□□□ -0.33
CASP3-202ENST00000393585 APPP05067 770 aa13□□□□□ -0.33
CASP3-202ENST00000393585 SCRN1Q12765 414 aa13□□□□□ -0.33
CASP3-202ENST00000393585 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
CASP3-202ENST00000393585 AIDAQ96BJ3 306 aa13□□□□□ -0.33
CASP3-202ENST00000393585 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
CASP3-202ENST00000393585 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
CASP3-202ENST00000393585 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
CASP3-202ENST00000393585 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
CASP3-202ENST00000393585 ZNF213O14771 459 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASP3-202ENST00000393585 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 A0A1B0GUL6 1792 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
CASP3-202ENST00000393585 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
CASP3-202ENST00000393585 CCT2P78371 535 aaKnown RBP12.98□□□□□ -0.33
CASP3-202ENST00000393585 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 PANK2Q9BZ23 570 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 PPFIA3O75145 1194 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 MBD4O95243 580 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
CASP3-202ENST00000393585 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
CASP3-202ENST00000393585 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 TMEM63CQ9P1W3 806 aa12.98□□□□□ -0.33
CASP3-202ENST00000393585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
CASP3-202ENST00000393585 FIBPO43427 364 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 TRIM37O94972 964 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 KLRK1P26718 216 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
CASP3-202ENST00000393585 NFIXQ14938 502 aa12.97□□□□□ -0.33
CASP3-202ENST00000393585 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms