RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF280AP59817 542 aaPredicted RBP9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 MTX1Q13505 466 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 PUM3Q15397 648 aaKnown RBP9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 STRIP1Q5VSL9 837 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 AGBL3Q8NEM8 1001 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 PCDHAC2Q9Y5I4 1007 aa9.55□□□□□ -0.88
HMGB3P1-201ENST00000393368 CIAO1O76071 339 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 ADORA1P30542 326 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 IL15P40933 162 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 TFCP2Q12800 502 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 CHAF1AQ13111 956 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 GRIK5Q16478 980 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 VPS37DQ86XT2 251 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 TDRD7Q8NHU6 1098 aaKnown RBP9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 ZNF408Q9H9D4 720 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 MYOZ2Q9NPC6 264 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 GGA3Q9NZ52 723 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 HDAC5Q9UQL6 1122 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 ZNF609O15014 1411 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 PSME4Q14997 1843 aa9.54□□□□□ -0.88
HMGB3P1-201ENST00000393368 COL1A1P02452 1464 aaPredicted RBP9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 IFIT1P09914 478 aaKnown RBP9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 SLC5A1P13866 664 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 SCARF1Q14162 830 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 ATP2B3Q16720 1220 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 ANGEL2Q5VTE6 544 aaKnown RBP9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 FBXO33Q7Z6M2 555 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 DNAJC5GQ8N7S2 189 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 LPIN2Q92539 896 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 CEP126Q9P2H0 1117 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 PGAP2Q9UHJ9 254 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 AOX1Q06278 1338 aa9.53□□□□□ -0.88
HMGB3P1-201ENST00000393368 FRAT2O75474 233 aaPredicted RBP9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 TIMM10P62072 90 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 CAVIN4Q5BKX8 364 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 MFSD14BQ5SR56 506 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 CST9Q5W186 159 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 CEP85Q6P2H3 762 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 MYO3BQ8WXR4 1341 aa9.52□□□□□ -0.89
HMGB3P1-201ENST00000393368 TMEM88BA6NKF7 163 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 WNT10BO00744 389 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 CELF2O95319 508 aaKnown RBP9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 PHKA1P46020 1223 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 ATP8B2P98198 1209 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 KRT26Q7Z3Y9 468 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 SSH3Q8TE77 659 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 DCPSQ96C86 337 aaKnown RBP9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
HMGB3P1-201ENST00000393368 PCNTO95613 3336 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 A0A1B0GUL7 405 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 CLRN2A0PK11 232 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 MS4A1P11836 297 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 G3BP1Q13283 466 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 OS9Q13438 667 aaPredicted RBP9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 CFAP100Q494V2 611 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 PRAMEF18Q5VWM3 479 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 CDC37L1Q7L3B6 337 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 KLRG1Q96E93 195 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 HDAC9Q9UKV0 1011 aa9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 ABT1Q9ULW3 272 aaKnown RBP9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
HMGB3P1-201ENST00000393368 RBM5P52756 815 aaKnown RBP eCLIP9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 FKBP1AP62942 108 aaKnown RBP9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 GRM1Q13255 1194 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 SULF1Q8IWU6 871 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 CDCA5Q96FF9 252 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 ZBED3Q96IU2 234 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 PRMT6Q96LA8 375 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 BCL11AQ9H165 835 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 ZBTB40Q9NUA8 1239 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 EXOC6BQ9Y2D4 811 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 CNTNAP1P78357 1384 aa9.49□□□□□ -0.89
HMGB3P1-201ENST00000393368 ARAP2Q8WZ64 1704 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 SPDYE2BA6NHP3 402 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 APBB1O00213 710 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 SPDYE6P0CI01 402 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 PDE3AQ14432 1141 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 DLGAP5Q15398 846 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 SIRT2Q8IXJ6 389 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 VEZTQ9HBM0 779 aa9.48□□□□□ -0.89
HMGB3P1-201ENST00000393368 TLR7Q9NYK1 1049 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms