RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 UQCRFS1P1P0C7P4 283 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 MCM4P33991 863 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 FOXD4L6Q3SYB3 417 aaPredicted RBP17.87■□□□□ 0.45
MKS1-202ENST00000393119 FOXD4L3Q6VB84 417 aaPredicted RBP17.87■□□□□ 0.45
MKS1-202ENST00000393119 ABCF2Q9UG63 623 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
MKS1-202ENST00000393119 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
MKS1-202ENST00000393119 CASZ1Q86V15 1759 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 COL1A1P02452 1464 aaPredicted RBP17.86■□□□□ 0.45
MKS1-202ENST00000393119 FGAP02671 866 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 ADRA2BP18089 450 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 STK3Q13188 491 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 TOB2Q14106 344 aaPredicted RBP17.86■□□□□ 0.45
MKS1-202ENST00000393119 BLOC1S2Q6QNY1 142 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 POLRMTO00411 1230 aaKnown RBP17.86■□□□□ 0.45
MKS1-202ENST00000393119 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 RNF20Q5VTR2 975 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 ADGRA1Q86SQ6 560 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 MIGA1Q8NAN2 632 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 TM6SF1Q9BZW5 370 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 INCENPQ9NQS7 918 aa17.86■□□□□ 0.45
MKS1-202ENST00000393119 COL24A1Q17RW2 1714 aa17.85■□□□□ 0.45
MKS1-202ENST00000393119 UTRNP46939 3433 aa17.85■□□□□ 0.45
MKS1-202ENST00000393119 RGL2O15211 777 aa17.85■□□□□ 0.45
MKS1-202ENST00000393119 NEK1Q96PY6 1258 aa17.85■□□□□ 0.45
MKS1-202ENST00000393119 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
MKS1-202ENST00000393119 PRKAB2O43741 272 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 MCM2P49736 904 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 DSCC1Q9BVC3 393 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
MKS1-202ENST00000393119 OLFM4Q6UX06 510 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 ARMT1Q9H993 441 aa17.84■□□□□ 0.45
MKS1-202ENST00000393119 CIZ1Q9ULV3 898 aaPredicted RBP17.84■□□□□ 0.45
MKS1-202ENST00000393119 E7EWF7 191 aa17.83■□□□□ 0.45
MKS1-202ENST00000393119 PLSCR1O15162 318 aa17.83■□□□□ 0.45
MKS1-202ENST00000393119 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.45
MKS1-202ENST00000393119 VPS37DQ86XT2 251 aa17.83■□□□□ 0.45
MKS1-202ENST00000393119 STK11IPQ8N1F8 1099 aa17.83■□□□□ 0.45
MKS1-202ENST00000393119 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.83■□□□□ 0.451e-6■■■■■ 38.5
MKS1-202ENST00000393119 SMIM22K7EJ46 135 aa17.83■□□□□ 0.44
MKS1-202ENST00000393119 UBE4AQ14139 1066 aa17.83■□□□□ 0.44
MKS1-202ENST00000393119 TSGA10IPQ3SY00 556 aa17.83■□□□□ 0.44
MKS1-202ENST00000393119 Q6ZUG5 572 aa17.83■□□□□ 0.44
MKS1-202ENST00000393119 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
MKS1-202ENST00000393119 APPP05067 770 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 ZFYP08048 801 aaPredicted RBP17.82■□□□□ 0.44
MKS1-202ENST00000393119 TTF1Q15361 905 aaPredicted RBP17.82■□□□□ 0.44
MKS1-202ENST00000393119 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
MKS1-202ENST00000393119 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 PSMA5P28066 241 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 CHAF1AQ13111 956 aaPredicted RBP17.82■□□□□ 0.44
MKS1-202ENST00000393119 GRAPQ13588 217 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
MKS1-202ENST00000393119 NBPF3Q9H094 633 aa17.82■□□□□ 0.44
MKS1-202ENST00000393119 MBD4O95243 580 aa17.81■□□□□ 0.44
MKS1-202ENST00000393119 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
MKS1-202ENST00000393119 ZNF804BA4D1E1 1349 aa17.81■□□□□ 0.44
MKS1-202ENST00000393119 GZF1Q9H116 711 aaPredicted RBP17.81■□□□□ 0.44
MKS1-202ENST00000393119 GPSM2P81274 684 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 UBE3CQ15386 1083 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 CAVIN4Q5BKX8 364 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
MKS1-202ENST00000393119 STRBPQ96SI9 672 aaKnown RBP17.8■□□□□ 0.44
MKS1-202ENST00000393119 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 PNPLA7Q6ZV29 1317 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 BRF1Q92994 677 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 AIDAQ96BJ3 306 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
MKS1-202ENST00000393119 EPB41L4AQ9HCS5 686 aaPredicted RBP17.8■□□□□ 0.44
MKS1-202ENST00000393119 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
MKS1-202ENST00000393119 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
MKS1-202ENST00000393119 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
MKS1-202ENST00000393119 ST5P78524 1137 aa17.79■□□□□ 0.44
MKS1-202ENST00000393119 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
MKS1-202ENST00000393119 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 MMP10P09238 476 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 CYP7A1P22680 504 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 HIBADHP31937 336 aaKnown RBP17.78■□□□□ 0.44
MKS1-202ENST00000393119 DYNLL1P63167 89 aaKnown RBP17.78■□□□□ 0.44
MKS1-202ENST00000393119 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
MKS1-202ENST00000393119 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 TBC1D10CQ8IV04 446 aa17.78■□□□□ 0.44
MKS1-202ENST00000393119 INTS4Q96HW7 963 aaKnown RBP17.78■□□□□ 0.44
MKS1-202ENST00000393119 RRAGDQ9NQL2 400 aaPredicted RBP17.78■□□□□ 0.44
MKS1-202ENST00000393119 PRDX5P30044 214 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 GRIK5Q16478 980 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 MCTP1Q6DN14 999 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 ZSCAN25Q6NSZ9 544 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 DEFB132Q7Z7B7 95 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 GJB2P29033 226 aa17.77■□□□□ 0.44
MKS1-202ENST00000393119 EVX2Q03828 476 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms