RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 Q6ZUG5 572 aa17.55■□□□□ 0.4
SHTN1-204ENST00000392903 PDCP20941 246 aa17.55■□□□□ 0.4
SHTN1-204ENST00000392903 KRT32Q14532 448 aa17.55■□□□□ 0.4
SHTN1-204ENST00000392903 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
SHTN1-204ENST00000392903 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 TULP2O00295 520 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 EXOC5O00471 708 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
SHTN1-204ENST00000392903 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
SHTN1-204ENST00000392903 CDC37L1Q7L3B6 337 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 IPO4Q8TEX9 1081 aaKnown RBP17.54■□□□□ 0.4
SHTN1-204ENST00000392903 MRFAP1L1Q96HT8 127 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 KCND1Q9NSA2 647 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 MAP3K15Q6ZN16 1313 aa17.54■□□□□ 0.4
SHTN1-204ENST00000392903 TRIM28Q13263 835 aaKnown RBP17.53■□□□□ 0.4
SHTN1-204ENST00000392903 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
SHTN1-204ENST00000392903 STOX1Q6ZVD7 989 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 XAGE2Q96GT9 111 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 ZBTB1Q9Y2K1 713 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 ITGB4P16144 1822 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 USP27XA6NNY8 438 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
SHTN1-204ENST00000392903 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
SHTN1-204ENST00000392903 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.4
SHTN1-204ENST00000392903 ELF2Q15723 593 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 CCDC158Q5M9N0 1113 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 SPATA32Q96LK8 384 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 PALLDQ8WX93 1383 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 SLU7O95391 586 aaKnown RBP17.52■□□□□ 0.4
SHTN1-204ENST00000392903 SCARF1Q14162 830 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 PI16Q6UXB8 463 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.4
SHTN1-204ENST00000392903 BRF1Q92994 677 aa17.52■□□□□ 0.4
SHTN1-204ENST00000392903 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
SHTN1-204ENST00000392903 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
SHTN1-204ENST00000392903 JAK2O60674 1132 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
SHTN1-204ENST00000392903 GREM2Q9H772 168 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 KIF2AO00139 706 aaPredicted RBP17.51■□□□□ 0.39
SHTN1-204ENST00000392903 CSF1RP07333 972 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 SKILP12757 684 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 IQCB1Q15051 598 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 ZNF446Q9NWS9 450 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHTN1-204ENST00000392903 V9GYY5 206 aaPredicted RBP17.51■□□□□ 0.39
SHTN1-204ENST00000392903 MAST3O60307 1309 aa17.51■□□□□ 0.39
SHTN1-204ENST00000392903 M0R2C6 588 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 NR1I2O75469 434 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 ITGA6P23229 1130 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 TTLL5Q6EMB2 1281 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 CHST3Q7LGC8 479 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 TRMT112Q9UI30 125 aaKnown RBP17.5■□□□□ 0.39
SHTN1-204ENST00000392903 AKAP2Q9Y2D5 859 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 BCL9O00512 1426 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 VGLL3A8MV65 326 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 BMS1Q14692 1282 aaKnown RBP17.5■□□□□ 0.39
SHTN1-204ENST00000392903 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 OSBP2Q969R2 916 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
SHTN1-204ENST00000392903 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-204ENST00000392903 CYP2C19P33261 490 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 METTL24Q5JXM2 366 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 CCAR2Q8N163 923 aaKnown RBP17.49■□□□□ 0.39
SHTN1-204ENST00000392903 ERICH4A6NGS2 130 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 ZAP70P43403 619 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 CCZ1BP86790 482 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
SHTN1-204ENST00000392903 ARID5BQ14865 1188 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
SHTN1-204ENST00000392903 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
SHTN1-204ENST00000392903 TFIP11Q9UBB9 837 aaKnown RBP17.49■□□□□ 0.39
SHTN1-204ENST00000392903 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
SHTN1-204ENST00000392903 DSCC1Q9BVC3 393 aa17.48■□□□□ 0.39
SHTN1-204ENST00000392903 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
SHTN1-204ENST00000392903 ST7Q9NRC1 585 aa17.48■□□□□ 0.39
SHTN1-204ENST00000392903 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
SHTN1-204ENST00000392903 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
SHTN1-204ENST00000392903 DZIP3Q86Y13 1208 aaKnown RBP17.48■□□□□ 0.39
SHTN1-204ENST00000392903 PGBD1Q96JS3 809 aa17.48■□□□□ 0.39
SHTN1-204ENST00000392903 E7EWF7 191 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 SCRN1Q12765 414 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 TSPYL1Q9H0U9 437 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 L2HGDHQ9H9P8 463 aa17.47■□□□□ 0.39
SHTN1-204ENST00000392903 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms