RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 TUBGCP6Q96RT7 1819 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 HSP90AB1P08238 724 aaKnown RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 MCM4P33991 863 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 MSS51Q4VC12 460 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 ZNF662Q6ZS27 426 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 METTL16Q86W50 562 aaKnown RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 SPSB2Q99619 263 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 LRRFIP2Q9Y608 721 aaKnown RBP5.51□□□□□ -1.53
GTDC1-205ENST00000392871 KDM3BQ7LBC6 1761 aa5.51□□□□□ -1.53
GTDC1-205ENST00000392871 ALS2Q96Q42 1657 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 EIF2S2P20042 333 aaKnown RBP5.5□□□□□ -1.53
GTDC1-205ENST00000392871 ERFEQ4G0M1 354 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 NT5DC4Q86YG4 428 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 RPAP2Q8IXW5 612 aaPredicted RBP5.5□□□□□ -1.53
GTDC1-205ENST00000392871 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
GTDC1-205ENST00000392871 STK31Q9BXU1 1019 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 CHMP5Q9NZZ3 219 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 HPS5Q9UPZ3 1129 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 LMO7Q8WWI1 1683 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 RGPD5Q99666 1765 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 PRAMEF22A3QJZ6 481 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 TLL1O43897 1013 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 NR1I2O75469 434 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 MPSTP25325 297 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
GTDC1-205ENST00000392871 PPP4CP60510 307 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 MPRIPQ6WCQ1 1025 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 DPH6Q7L8W6 267 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 ZSCAN29Q8IWY8 852 aaPredicted RBP5.5□□□□□ -1.53
GTDC1-205ENST00000392871 FOXJ1Q92949 421 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 SAP130Q9H0E3 1048 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 WWC3Q9ULE0 1092 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 CEMIPQ8WUJ3 1361 aa5.5□□□□□ -1.53
GTDC1-205ENST00000392871 SNPHO15079 494 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 GNAI2P04899 355 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 PROSER3Q2NL68 480 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CCDC30Q5VVM6 783 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 ZNF530Q6P9A1 599 aaPredicted RBP5.49□□□□□ -1.53
GTDC1-205ENST00000392871 UNC5CLQ8IV45 518 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 ZNF592Q92610 1267 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 SNX21Q969T3 373 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 IL1RAPL2Q9NP60 686 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CHPF2Q9P2E5 772 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 K7ELQ4 463 aaPredicted RBP5.49□□□□□ -1.53
GTDC1-205ENST00000392871 TNNI2P48788 182 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 PDE1AP54750 535 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 COPS2P61201 443 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 TAF7Q15545 349 aaPredicted RBP5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CHRNA2Q15822 529 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 LINC01559Q495D7 138 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CCDC24Q8N4L8 307 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 ANKRD24Q8TF21 1146 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 TNPO1Q92973 898 aaKnown RBP5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CHAMP1Q96JM3 812 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 PRR14Q9BWN1 585 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 PANK2Q9BZ23 570 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 USP44Q9H0E7 712 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 IL25Q9H293 177 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 CCDC87Q9NVE4 849 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 SALL3Q9BXA9 1300 aa5.49□□□□□ -1.53
GTDC1-205ENST00000392871 PHRF1Q9P1Y6 1649 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 SCAMP3O14828 347 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 TOM1O60784 492 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 IGHA2P01877 340 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 SCTRP47872 440 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 EIF4A1P60842 406 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 PIP4K2BP78356 416 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 PKP1Q13835 747 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 BAP1Q92560 729 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 USP26Q9BXU7 913 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 PCDHB11Q9Y5F2 797 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 ADCY9O60503 1353 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 CPDO75976 1380 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 IBTKQ9P2D0 1353 aaPredicted RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 PXDNLA1KZ92 1463 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 SOWAHBA6NEL2 793 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 TREHO43280 583 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 HTATSF1O43719 755 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 MAP4K4O95819 1239 aaPredicted RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 HSP90AA1P07900 732 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 NBPF7P0C2Y1 421 aaPredicted RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 SF3B2Q13435 895 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 HELQQ8TDG4 1101 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 DHX38Q92620 1227 aaKnown RBP5.48□□□□□ -1.53
GTDC1-205ENST00000392871 TINF2Q9BSI4 451 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 PARP2Q9UGN5 583 aa5.48□□□□□ -1.53
GTDC1-205ENST00000392871 NHSL1Q5SYE7 1610 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 SOS1Q07889 1333 aaPredicted RBP5.47□□□□□ -1.53
GTDC1-205ENST00000392871 HMMRO75330 724 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 UBTFL1P0CB47 393 aaPredicted RBP5.47□□□□□ -1.53
GTDC1-205ENST00000392871 MX1P20591 662 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 MAPK8P45983 427 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 RAB3GAP1Q15042 981 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 SF3A1Q15459 793 aaKnown RBP5.47□□□□□ -1.53
GTDC1-205ENST00000392871 FAM26DQ5JW98 314 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 POTEGQ6S5H5 508 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 ZGPATQ8N5A5 531 aaKnown RBP5.47□□□□□ -1.53
GTDC1-205ENST00000392871 MARVELD3Q96A59 401 aa5.47□□□□□ -1.53
GTDC1-205ENST00000392871 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
GTDC1-205ENST00000392871 PRDM11Q9NQV5 511 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms