RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SPATA5Q8NB90 893 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 SETDB2Q96T68 719 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 PUS7LQ9H0K6 701 aaKnown RBP23.81■■□□□ 1.4
PTPN11-202ENST00000392597 PIH1D3Q9NQM4 214 aaKnown RBP23.81■■□□□ 1.4
PTPN11-202ENST00000392597 UBR3Q6ZT12 1888 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 A0A1B0GUL6 1792 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 E7EWF7 191 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 GPAA1O43292 621 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 CHRNDQ07001 517 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 SLC9C2Q5TAH2 1124 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 ANKRD18AQ8IVF6 992 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 NECAB1Q8N987 351 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 ATP6V1DQ9Y5K8 247 aa23.81■■□□□ 1.4
PTPN11-202ENST00000392597 FOXP2O15409 715 aa23.8■■□□□ 1.4
PTPN11-202ENST00000392597 PRPF40AO75400 957 aaKnown RBP23.8■■□□□ 1.4
PTPN11-202ENST00000392597 IMMTQ16891 758 aaKnown RBP23.8■■□□□ 1.4
PTPN11-202ENST00000392597 Q6ZUG5 572 aa23.8■■□□□ 1.4
PTPN11-202ENST00000392597 AKT1S1Q96B36 256 aa23.8■■□□□ 1.4
PTPN11-202ENST00000392597 AGXT2Q9BYV1 514 aa23.8■■□□□ 1.4
PTPN11-202ENST00000392597 BSDC1Q9NW68 430 aaPredicted RBP23.8■■□□□ 1.4
PTPN11-202ENST00000392597 MYO5AQ9Y4I1 1855 aaKnown RBP23.8■■□□□ 1.4
PTPN11-202ENST00000392597 PDCP20941 246 aa23.79■■□□□ 1.4
PTPN11-202ENST00000392597 EXOSC10Q01780 885 aaKnown RBP23.79■■□□□ 1.4
PTPN11-202ENST00000392597 GTF2E1P29083 439 aaPredicted RBP23.79■■□□□ 1.4
PTPN11-202ENST00000392597 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
PTPN11-202ENST00000392597 FBXL16Q8N461 479 aa23.79■■□□□ 1.4
PTPN11-202ENST00000392597 IDH1O75874 414 aaKnown RBP23.78■■□□□ 1.4
PTPN11-202ENST00000392597 PDE6AP16499 860 aa23.78■■□□□ 1.4
PTPN11-202ENST00000392597 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
PTPN11-202ENST00000392597 GTF3C6Q969F1 213 aa23.78■■□□□ 1.4
PTPN11-202ENST00000392597 SRP68Q9UHB9 627 aaKnown RBP23.78■■□□□ 1.4
PTPN11-202ENST00000392597 C4AP0C0L4 1744 aa23.78■■□□□ 1.4
PTPN11-202ENST00000392597 TCRBV5S4A2TA0A5A2 114 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 MBD3O95983 291 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 FGAP02671 866 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 C3orf67Q6ZVT6 689 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 COL4A1P02462 1669 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 F13A1P00488 732 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 MAP3K12Q12852 859 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 UBE4AQ14139 1066 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 NBPF5PQ86XG9 351 aaPredicted RBP23.77■■□□□ 1.4
PTPN11-202ENST00000392597 ARHGEF1Q92888 912 aaKnown RBP23.77■■□□□ 1.4
PTPN11-202ENST00000392597 MTMR6Q9Y217 621 aa23.77■■□□□ 1.4
PTPN11-202ENST00000392597 ADRA2BP18089 450 aa23.76■■□□□ 1.39
PTPN11-202ENST00000392597 TTLL5Q6EMB2 1281 aa23.76■■□□□ 1.39
PTPN11-202ENST00000392597 TPTE2Q6XPS3 522 aa23.76■■□□□ 1.39
PTPN11-202ENST00000392597 TMEM87AQ8NBN3 555 aa23.76■■□□□ 1.39
PTPN11-202ENST00000392597 ANO8Q9HCE9 1232 aaPredicted RBP23.76■■□□□ 1.39
PTPN11-202ENST00000392597 ZNF532Q9HCE3 1301 aa23.76■■□□□ 1.39
PTPN11-202ENST00000392597 ZNF804BA4D1E1 1349 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 FGD1P98174 961 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 SLC15A2Q16348 729 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 NLRP3Q96P20 1036 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 SNAP23O00161 211 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 AMIGO3Q86WK7 504 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 BRF1Q92994 677 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 TFCP2L1Q9NZI6 479 aa23.75■■□□□ 1.39
PTPN11-202ENST00000392597 BCAMP50895 628 aa23.74■■□□□ 1.39
PTPN11-202ENST00000392597 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
PTPN11-202ENST00000392597 CHMP4CQ96CF2 233 aa23.74■■□□□ 1.39
PTPN11-202ENST00000392597 LLPHQ9BRT6 129 aaKnown RBP23.74■■□□□ 1.39
PTPN11-202ENST00000392597 WWC3Q9ULE0 1092 aa23.74■■□□□ 1.39
PTPN11-202ENST00000392597 QSER1Q2KHR3 1735 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 ZMYM6O95789 1325 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 A0A0G2JLW4 131 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 PFKFB2O60825 505 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 MRE11P49959 708 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 TRAPPC3LQ5T215 181 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 LARP1BQ659C4 914 aaKnown RBP23.73■■□□□ 1.39
PTPN11-202ENST00000392597 GPT2Q8TD30 523 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 CHAMP1Q96JM3 812 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 TCHHQ07283 1943 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 WDR19Q8NEZ3 1342 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.73■■□□□ 1.39
PTPN11-202ENST00000392597 RFC4P35249 363 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 ALX1Q15699 326 aa23.73■■□□□ 1.39
PTPN11-202ENST00000392597 GNL3LQ9NVN8 582 aaKnown RBP23.73■■□□□ 1.39
PTPN11-202ENST00000392597 ZNF213O14771 459 aa23.72■■□□□ 1.39
PTPN11-202ENST00000392597 MINPP1Q9UNW1 487 aa23.72■■□□□ 1.39
PTPN11-202ENST00000392597 TAF1P21675 1872 aa23.72■■□□□ 1.39
PTPN11-202ENST00000392597 PHF14O94880 888 aa23.71■■□□□ 1.39
PTPN11-202ENST00000392597 STK3Q13188 491 aa23.71■■□□□ 1.39
PTPN11-202ENST00000392597 FLAD1Q8NFF5 587 aa23.71■■□□□ 1.39
PTPN11-202ENST00000392597 ZNF274Q96GC6 653 aaPredicted RBP23.71■■□□□ 1.39
PTPN11-202ENST00000392597 NCLP19338 710 aaKnown RBP23.7■■□□□ 1.39
PTPN11-202ENST00000392597 EVCP57679 992 aa23.7■■□□□ 1.39
PTPN11-202ENST00000392597 ZNF445P59923 1031 aa23.7■■□□□ 1.39
PTPN11-202ENST00000392597 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.39
PTPN11-202ENST00000392597 CAVIN1Q6NZI2 390 aaKnown RBP23.7■■□□□ 1.39
PTPN11-202ENST00000392597 AIDAQ96BJ3 306 aa23.7■■□□□ 1.39
PTPN11-202ENST00000392597 STRBPQ96SI9 672 aaKnown RBP23.7■■□□□ 1.39
PTPN11-202ENST00000392597 LRRC2Q9BYS8 371 aa23.7■■□□□ 1.39
PTPN11-202ENST00000392597 CARMIL3Q8ND23 1372 aa23.7■■□□□ 1.38
PTPN11-202ENST00000392597 NCOA7Q8NI08 942 aa23.7■■□□□ 1.38
PTPN11-202ENST00000392597 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
PTPN11-202ENST00000392597 VPS37CA5D8V6 355 aaPredicted RBP23.69■■□□□ 1.38
PTPN11-202ENST00000392597 MCM5P33992 734 aa23.69■■□□□ 1.38
PTPN11-202ENST00000392597 CSPP1Q1MSJ5 1256 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms