RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NEK1Q96PY6 1258 aa25.46■■□□□ 1.67
SPHK1-202ENST00000392496 GNL3LQ9NVN8 582 aaKnown RBP25.46■■□□□ 1.67
SPHK1-202ENST00000392496 STK32BQ9NY57 414 aa25.46■■□□□ 1.67
SPHK1-202ENST00000392496 PDE6AP16499 860 aa25.45■■□□□ 1.66
SPHK1-202ENST00000392496 SH2B1Q9NRF2 756 aaPredicted RBP25.45■■□□□ 1.66
SPHK1-202ENST00000392496 CTNNA3Q9UI47 895 aa25.45■■□□□ 1.66
SPHK1-202ENST00000392496 SERPINB2P05120 415 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 MAP3K12Q12852 859 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 GBP4Q96PP9 640 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 TCRBV5S4A2TA0A5A2 114 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 GPAA1O43292 621 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 ST5P78524 1137 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 CAVIN4Q5BKX8 364 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 CLEC17AQ6ZS10 378 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 TFCP2L1Q9NZI6 479 aa25.44■■□□□ 1.66
SPHK1-202ENST00000392496 ZNF532Q9HCE3 1301 aa25.43■■□□□ 1.66
SPHK1-202ENST00000392496 GRAPQ13588 217 aa25.43■■□□□ 1.66
SPHK1-202ENST00000392496 GRAPLQ8TC17 118 aaPredicted RBP25.43■■□□□ 1.66
SPHK1-202ENST00000392496 AKT1S1Q96B36 256 aa25.43■■□□□ 1.66
SPHK1-202ENST00000392496 WWC3Q9ULE0 1092 aa25.43■■□□□ 1.66
SPHK1-202ENST00000392496 HMGB1P09429 215 aaKnown RBP25.42■■□□□ 1.66
SPHK1-202ENST00000392496 FLAD1Q8NFF5 587 aa25.42■■□□□ 1.66
SPHK1-202ENST00000392496 FOXP2O15409 715 aa25.41■■□□□ 1.66
SPHK1-202ENST00000392496 GYG1P46976 350 aa25.41■■□□□ 1.66
SPHK1-202ENST00000392496 DDX11L8A8MPP1 907 aa25.41■■□□□ 1.66
SPHK1-202ENST00000392496 SOCS7O14512 581 aa25.41■■□□□ 1.66
SPHK1-202ENST00000392496 ZNF827Q17R98 1081 aa25.41■■□□□ 1.66
SPHK1-202ENST00000392496 FAM84BQ96KN1 310 aaPredicted RBP25.41■■□□□ 1.66
SPHK1-202ENST00000392496 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.41■■□□□ 1.66
SPHK1-202ENST00000392496 CRY2Q49AN0 593 aa25.4■■□□□ 1.66
SPHK1-202ENST00000392496 STOX1Q6ZVD7 989 aa25.4■■□□□ 1.66
SPHK1-202ENST00000392496 FBXO33Q7Z6M2 555 aa25.4■■□□□ 1.66
SPHK1-202ENST00000392496 LAMA4Q16363 1823 aa25.4■■□□□ 1.66
SPHK1-202ENST00000392496 POLRMTO00411 1230 aaKnown RBP25.39■■□□□ 1.66
SPHK1-202ENST00000392496 SEMA3EO15041 775 aa25.39■■□□□ 1.66
SPHK1-202ENST00000392496 ZBTB22O15209 634 aa25.39■■□□□ 1.66
SPHK1-202ENST00000392496 COL9A3Q14050 684 aaPredicted RBP25.39■■□□□ 1.66
SPHK1-202ENST00000392496 LARGE1O95461 756 aa25.39■■□□□ 1.65
SPHK1-202ENST00000392496 DDR1Q08345 913 aa25.39■■□□□ 1.65
SPHK1-202ENST00000392496 VPS37DQ86XT2 251 aa25.39■■□□□ 1.65
SPHK1-202ENST00000392496 LARP6Q9BRS8 491 aaKnown RBP25.39■■□□□ 1.65
SPHK1-202ENST00000392496 DENND2AQ9ULE3 1009 aa25.39■■□□□ 1.65
SPHK1-202ENST00000392496 WTIPA6NIX2 430 aaPredicted RBP25.38■■□□□ 1.65
SPHK1-202ENST00000392496 FGAP02671 866 aa25.38■■□□□ 1.65
SPHK1-202ENST00000392496 TOB2Q14106 344 aaPredicted RBP25.38■■□□□ 1.65
SPHK1-202ENST00000392496 SLC15A2Q16348 729 aa25.38■■□□□ 1.65
SPHK1-202ENST00000392496 IMMTQ16891 758 aaKnown RBP25.38■■□□□ 1.65
SPHK1-202ENST00000392496 MAGEB6Q8N7X4 407 aa25.38■■□□□ 1.65
SPHK1-202ENST00000392496 RPGRQ92834 1020 aaKnown RBP25.38■■□□□ 1.65
SPHK1-202ENST00000392496 E7EWF7 191 aa25.37■■□□□ 1.65
SPHK1-202ENST00000392496 PKP1Q13835 747 aa25.37■■□□□ 1.65
SPHK1-202ENST00000392496 ME3Q16798 604 aa25.37■■□□□ 1.65
SPHK1-202ENST00000392496 TPCN1Q9ULQ1 816 aa25.37■■□□□ 1.65
SPHK1-202ENST00000392496 PDS5AQ29RF7 1337 aaKnown RBP25.37■■□□□ 1.65
SPHK1-202ENST00000392496 TTLL5Q6EMB2 1281 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 DHX32Q7L7V1 743 aaKnown RBP25.36■■□□□ 1.65
SPHK1-202ENST00000392496 ZDHHC9Q9Y397 364 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 PTMSP20962 102 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 COL23A1Q86Y22 540 aaPredicted RBP25.36■■□□□ 1.65
SPHK1-202ENST00000392496 NLGN1Q8N2Q7 840 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 AIDAQ96BJ3 306 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 TCEANC2Q96MN5 208 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 STRBPQ96SI9 672 aaKnown RBP25.36■■□□□ 1.65
SPHK1-202ENST00000392496 LRP2BPQ9P2M1 347 aa25.36■■□□□ 1.65
SPHK1-202ENST00000392496 COL1A1P02452 1464 aaPredicted RBP25.35■■□□□ 1.65
SPHK1-202ENST00000392496 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
SPHK1-202ENST00000392496 IQSEC3Q9UPP2 1182 aaPredicted RBP25.35■■□□□ 1.65
SPHK1-202ENST00000392496 LEMD3Q9Y2U8 911 aa25.35■■□□□ 1.65
SPHK1-202ENST00000392496 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
SPHK1-202ENST00000392496 KLRG2A4D1S0 409 aaPredicted RBP25.34■■□□□ 1.65
SPHK1-202ENST00000392496 BRD1O95696 1058 aa25.34■■□□□ 1.65
SPHK1-202ENST00000392496 HIBADHP31937 336 aaKnown RBP25.34■■□□□ 1.65
SPHK1-202ENST00000392496 CCDC83Q8IWF9 413 aa25.34■■□□□ 1.65
SPHK1-202ENST00000392496 BAG4O95429 457 aaKnown RBP25.33■■□□□ 1.65
SPHK1-202ENST00000392496 EXOSC10Q01780 885 aaKnown RBP25.33■■□□□ 1.65
SPHK1-202ENST00000392496 ALX1Q15699 326 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 Q6ZUG5 572 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 SMC3Q9UQE7 1217 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 ZMYM6O95789 1325 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 IRS2Q9Y4H2 1338 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 NRXN2Q9P2S2 1712 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 MYH13Q9UKX3 1938 aa25.33■■□□□ 1.65
SPHK1-202ENST00000392496 HOXA10P31260 410 aaPredicted RBP25.33■■□□□ 1.65
SPHK1-202ENST00000392496 XDHP47989 1333 aa25.33■■□□□ 1.64
SPHK1-202ENST00000392496 KLRK1P26718 216 aa25.32■■□□□ 1.64
SPHK1-202ENST00000392496 ST3GAL1Q11201 340 aa25.32■■□□□ 1.64
SPHK1-202ENST00000392496 PNPLA7Q6ZV29 1317 aa25.32■■□□□ 1.64
SPHK1-202ENST00000392496 ZNF213O14771 459 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 AGXT2Q9BYV1 514 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 PATL2C9JE40 543 aaKnown RBP25.31■■□□□ 1.64
SPHK1-202ENST00000392496 GOLGA6L22H0YM25 854 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 MBD4O95243 580 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 GNAT2P19087 354 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 CRAMP1Q96RY5 1269 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 ANKIB1Q9P2G1 1089 aa25.31■■□□□ 1.64
SPHK1-202ENST00000392496 BBOX1O75936 387 aa25.3■■□□□ 1.64
SPHK1-202ENST00000392496 C15orf52Q6ZUT6 534 aaKnown RBP25.3■■□□□ 1.64
SPHK1-202ENST00000392496 FBXL16Q8N461 479 aa25.3■■□□□ 1.64
SPHK1-202ENST00000392496 ANO8Q9HCE9 1232 aaPredicted RBP25.3■■□□□ 1.64
SPHK1-202ENST00000392496 ABCF2Q9UG63 623 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms