RNA–Protein interactions for RNA: ENST00000392045.7

SP140-203, Transcript of SP140 nuclear body protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SP140, Length 3,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-203ENST00000392045 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
SP140-203ENST00000392045 LIG1P18858 919 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 SCP2P22307 547 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 CCT2P78371 535 aaKnown RBP9.35□□□□□ -0.91
SP140-203ENST00000392045 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 KRT27Q7Z3Y8 459 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 PDCL2Q8N4E4 241 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 SASH1O94885 1247 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 IPO7O95373 1038 aaKnown RBP9.35□□□□□ -0.91
SP140-203ENST00000392045 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 PDCP20941 246 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 PSMA5P28066 241 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 KRT85P78386 507 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 ANKRD1Q15327 319 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 CXorf56Q9H5V9 222 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
SP140-203ENST00000392045 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
SP140-203ENST00000392045 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
SP140-203ENST00000392045 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 COL14A1Q05707 1796 aaKnown RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 NMIQ13287 307 aaPredicted RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 CDC37L1Q7L3B6 337 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 ARHGEF1Q92888 912 aaKnown RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 PLCH1Q4KWH8 1693 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 GPTP24298 496 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 TOB2Q14106 344 aaPredicted RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 CWF19L2Q2TBE0 894 aaKnown RBP9.34□□□□□ -0.91
SP140-203ENST00000392045 USPL1Q5W0Q7 1092 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 AACSQ86V21 672 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 FAM227BQ96M60 508 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
SP140-203ENST00000392045 RPS6KB1P23443 525 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 LARP1BQ659C4 914 aaKnown RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 RIC3Q7Z5B4 369 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 C17orf53Q8N3J3 647 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 XAGE3Q8WTP9 111 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 EAF2Q96CJ1 260 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 SLC4A9Q96Q91 983 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 HMG20BQ9P0W2 317 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 PA2G4Q9UQ80 394 aaKnown RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 SHANK3Q9BYB0 1731 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 A0A0D9SFI3 127 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 VPS37CA5D8V6 355 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 GOLGA6L6A8MZA4 724 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 RBM5P52756 815 aaKnown RBP eCLIP9.33□□□□□ -0.92
SP140-203ENST00000392045 COL9A3Q14050 684 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 MYBPC2Q14324 1141 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 TTLL7Q6ZT98 887 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 NECAB1Q8N987 351 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 SCAND2PQ9GZW5 306 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 SUDS3Q9H7L9 328 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 PAPPAQ13219 1627 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 CCDC189A1A4V9 331 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 GRM8O00222 908 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 CTIFO43310 598 aaKnown RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 APBA3O96018 575 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 SNRPA1P09661 255 aaKnown RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 ZRSR2Q15696 482 aaKnown RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 ZNF772Q68DY9 489 aaPredicted RBP9.33□□□□□ -0.92
SP140-203ENST00000392045 SUCLG2Q96I99 432 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 NUP62CLQ9H1M0 184 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 PYCARDQ9ULZ3 195 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 COL15A1P39059 1388 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 GLI3P10071 1580 aa9.33□□□□□ -0.92
SP140-203ENST00000392045 RBM6P78332 1123 aaKnown RBP9.32□□□□□ -0.92
SP140-203ENST00000392045 TYRO3Q06418 890 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 DEFB132Q7Z7B7 95 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 RPAINQ86UA6 219 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 PLA2G4DQ86XP0 818 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 FEZ1Q99689 392 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 BICC1Q9H694 974 aaKnown RBP9.32□□□□□ -0.92
SP140-203ENST00000392045 KLHL33A6NCF5 533 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 PDIA6Q15084 440 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 SF3A1Q15459 793 aaKnown RBP9.32□□□□□ -0.92
SP140-203ENST00000392045 CCDC91Q7Z6B0 441 aa9.32□□□□□ -0.92
SP140-203ENST00000392045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.32□□□□□ -0.92
SP140-203ENST00000392045 MSL3Q8N5Y2 521 aaKnown RBP9.32□□□□□ -0.92
SP140-203ENST00000392045 CTAGE5O15320 804 aa9.31□□□□□ -0.92
SP140-203ENST00000392045 BLOC1S2Q6QNY1 142 aa9.31□□□□□ -0.92
SP140-203ENST00000392045 DRC1Q96MC2 740 aa9.31□□□□□ -0.92
SP140-203ENST00000392045 CLSTN2Q9H4D0 955 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms