RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 GRIA4P48058 902 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 ARL4DP49703 201 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 IKBKEQ14164 716 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 PRPF40BQ6NWY9 871 aaKnown RBP6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 KLHDC7BQ96G42 594 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 SOX17Q9H6I2 414 aaPredicted RBP6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 NLRP2Q9NX02 1062 aa6.69□□□□□ -1.34
SNORA40.3-201ENST00000390964 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 GADD45BO75293 160 aaPredicted RBP6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 ITPKAP23677 461 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 PTPN12Q05209 780 aaKnown RBP6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 FBF1Q8TES7 1133 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 CLEC4MQ9H2X3 399 aaPredicted RBP6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 TRAK1Q9UPV9 953 aa6.68□□□□□ -1.34
SNORA40.3-201ENST00000390964 F8W735 103 aaPredicted RBP6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 SPRED3Q2MJR0 410 aa6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 EPS8L3Q8TE67 593 aaKnown RBP6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 AKTIPQ9H8T0 292 aa6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 KCNK4Q9NYG8 393 aa6.67□□□□□ -1.34
SNORA40.3-201ENST00000390964 NOS3P29474 1203 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 MAPK8P45983 427 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 IREB2P48200 963 aaKnown RBP6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 DOC2BQ14184 412 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 GRM2Q14416 872 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 DUOXA2Q1HG44 320 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 ALG1LQ6GMV1 187 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 HOMEZQ8IX15 550 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 ABCB6Q9NP58 842 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 PPP4R2Q9NY27 417 aa6.66□□□□□ -1.34
SNORA40.3-201ENST00000390964 TMEM238LA0A1B0GVL6 79 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 ADAM11O75078 769 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 PCDH1Q08174 1060 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 HGSNATQ68CP4 663 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 Q6ZS46 218 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 ZNF576Q9H609 170 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
SNORA40.3-201ENST00000390964 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 WISP1O95388 367 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 ATP2B2Q01814 1243 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 ZNF423Q2M1K9 1284 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 RPS26P11Q5JNZ5 115 aaPredicted RBP6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 PI16Q6UXB8 463 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 DZIP1LQ8IYY4 767 aaKnown RBP6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 BCO2Q9BYV7 579 aa6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 GZF1Q9H116 711 aaPredicted RBP6.64□□□□□ -1.35
SNORA40.3-201ENST00000390964 ANKRD33BA6NCL7 494 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 GIPC1O14908 333 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 ALX3O95076 343 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 B3GALT4O96024 378 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 P4HBP07237 508 aaKnown RBP6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 XRCC5P13010 732 aaKnown RBP6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 NLRP12P59046 1061 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 FGD1P98174 961 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 NKAPLQ5M9Q1 402 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 SRCIN1Q9C0H9 1055 aa6.63□□□□□ -1.35
SNORA40.3-201ENST00000390964 MEGF11A6BM72 1044 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 FURINP09958 794 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 GSTM4Q03013 218 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 RSPO4Q2I0M5 234 aaPredicted RBP6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 DNAJC14Q6Y2X3 702 aaPredicted RBP6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 DDX54Q8TDD1 881 aaKnown RBP6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 TP53INP1Q96A56 240 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 RNF208Q9H0X6 261 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 WWC3Q9ULE0 1092 aa6.62□□□□□ -1.35
SNORA40.3-201ENST00000390964 K7ELQ4 463 aaPredicted RBP6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 CYP11A1P05108 521 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 LDHBP07195 334 aaKnown RBP6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 ERCC3P19447 782 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 FCGRTP55899 365 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 CCDC27Q2M243 656 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 DTHD1Q6ZMT9 781 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 UBASH3BQ8TF42 649 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 FRMD6Q96NE9 622 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 NRSN2Q9GZP1 204 aa6.61□□□□□ -1.35
SNORA40.3-201ENST00000390964 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms