RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 FGD1P98174 961 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 EXOSC10Q01780 885 aaKnown RBP21.57■■□□□ 1.04
ACTN4-202ENST00000390009 IMMTQ16891 758 aaKnown RBP21.57■■□□□ 1.04
ACTN4-202ENST00000390009 SLC10A5Q5PT55 438 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 ANKRD18AQ8IVF6 992 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 SEPT12Q8IYM1 358 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 GTF3C6Q969F1 213 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 SETDB2Q96T68 719 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 MTMR6Q9Y217 621 aa21.57■■□□□ 1.04
ACTN4-202ENST00000390009 ZNF532Q9HCE3 1301 aa21.56■■□□□ 1.04
ACTN4-202ENST00000390009 PDE6AP16499 860 aa21.56■■□□□ 1.04
ACTN4-202ENST00000390009 CAVIN1Q6NZI2 390 aaKnown RBP21.56■■□□□ 1.04
ACTN4-202ENST00000390009 AMIGO3Q86WK7 504 aa21.56■■□□□ 1.04
ACTN4-202ENST00000390009 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
ACTN4-202ENST00000390009 BCAMP50895 628 aa21.55■■□□□ 1.04
ACTN4-202ENST00000390009 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
ACTN4-202ENST00000390009 AGXT2Q9BYV1 514 aa21.55■■□□□ 1.04
ACTN4-202ENST00000390009 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
ACTN4-202ENST00000390009 ATP6V1DQ9Y5K8 247 aa21.55■■□□□ 1.04
ACTN4-202ENST00000390009 TCRBV5S4A2TA0A5A2 114 aa21.55■■□□□ 1.04
ACTN4-202ENST00000390009 HAND2P61296 217 aa21.55■■□□□ 1.04
ACTN4-202ENST00000390009 LARP1BQ659C4 914 aaKnown RBP21.55■■□□□ 1.04
ACTN4-202ENST00000390009 VPS37CA5D8V6 355 aaPredicted RBP21.54■■□□□ 1.04
ACTN4-202ENST00000390009 XRCC6P12956 609 aaKnown RBP eCLIP21.54■■□□□ 1.048e-6■■□□□ 13.6
ACTN4-202ENST00000390009 PDIA4P13667 645 aaKnown RBP21.54■■□□□ 1.04
ACTN4-202ENST00000390009 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
ACTN4-202ENST00000390009 GAS2L3Q86XJ1 694 aa21.54■■□□□ 1.04
ACTN4-202ENST00000390009 GDPD2Q9HCC8 539 aa21.54■■□□□ 1.04
ACTN4-202ENST00000390009 BSDC1Q9NW68 430 aaPredicted RBP21.54■■□□□ 1.04
ACTN4-202ENST00000390009 MBD3O95983 291 aa21.53■■□□□ 1.04
ACTN4-202ENST00000390009 PDCP20941 246 aa21.53■■□□□ 1.04
ACTN4-202ENST00000390009 MRE11P49959 708 aa21.53■■□□□ 1.04
ACTN4-202ENST00000390009 BRPF3Q9ULD4 1205 aa21.53■■□□□ 1.04
ACTN4-202ENST00000390009 MAP3K12Q12852 859 aa21.53■■□□□ 1.04
ACTN4-202ENST00000390009 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
ACTN4-202ENST00000390009 GRPEL1Q9HAV7 217 aa21.52■■□□□ 1.04
ACTN4-202ENST00000390009 ZNF213O14771 459 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 APOBRQ0VD83 1088 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 SCRN1Q12765 414 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 USP48Q86UV5 1035 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 TMEM87AQ8NBN3 555 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.03
ACTN4-202ENST00000390009 NLRP3Q96P20 1036 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 RTN4Q9NQC3 1192 aaKnown RBP21.52■■□□□ 1.03
ACTN4-202ENST00000390009 CNPY2Q9Y2B0 182 aa21.52■■□□□ 1.03
ACTN4-202ENST00000390009 PFKFB2O60825 505 aa21.51■■□□□ 1.03
ACTN4-202ENST00000390009 ZSCAN23Q3MJ62 389 aa21.51■■□□□ 1.03
ACTN4-202ENST00000390009 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
ACTN4-202ENST00000390009 CHST3Q7LGC8 479 aa21.51■■□□□ 1.03
ACTN4-202ENST00000390009 MAGEB6Q8N7X4 407 aa21.51■■□□□ 1.03
ACTN4-202ENST00000390009 BCL11BQ9C0K0 894 aaPredicted RBP21.51■■□□□ 1.03
ACTN4-202ENST00000390009 AIDAQ96BJ3 306 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 RBM27Q9P2N5 1060 aaKnown RBP21.5■■□□□ 1.03
ACTN4-202ENST00000390009 MINPP1Q9UNW1 487 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 JAK2O60674 1132 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 PHF14O94880 888 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 RFC4P35249 363 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 ZNF445P59923 1031 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 UBE4AQ14139 1066 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 FBXL16Q8N461 479 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 ZNF804BA4D1E1 1349 aa21.5■■□□□ 1.03
ACTN4-202ENST00000390009 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 FAM196AQ6ZSG2 479 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 CDC37L1Q7L3B6 337 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 STRBPQ96SI9 672 aaKnown RBP21.49■■□□□ 1.03
ACTN4-202ENST00000390009 QTRT2Q9H974 415 aaKnown RBP21.49■■□□□ 1.03
ACTN4-202ENST00000390009 APPP05067 770 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 NCOA7Q8NI08 942 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 TMEM63CQ9P1W3 806 aa21.49■■□□□ 1.03
ACTN4-202ENST00000390009 GADD45BO75293 160 aaPredicted RBP21.48■■□□□ 1.03
ACTN4-202ENST00000390009 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
ACTN4-202ENST00000390009 CCDC24Q8N4L8 307 aa21.48■■□□□ 1.03
ACTN4-202ENST00000390009 LLPHQ9BRT6 129 aaKnown RBP21.48■■□□□ 1.03
ACTN4-202ENST00000390009 LRRC4BQ9NT99 713 aa21.48■■□□□ 1.03
ACTN4-202ENST00000390009 WTIPA6NIX2 430 aaPredicted RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 GYG1P46976 350 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 CHD4Q14839 1912 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 BRWD3Q6RI45 1802 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 UBR3Q6ZT12 1888 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 MCM5P33992 734 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 DNM1Q05193 864 aaKnown RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 RALYLQ86SE5 291 aaKnown RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 SMARCC2Q8TAQ2 1214 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 ZNF274Q96GC6 653 aaPredicted RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 NBPF3Q9H094 633 aa21.47■■□□□ 1.03
ACTN4-202ENST00000390009 IQSEC3Q9UPP2 1182 aaPredicted RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
ACTN4-202ENST00000390009 MBD4O95243 580 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
ACTN4-202ENST00000390009 PANK2Q9BZ23 570 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 GNL3LQ9NVN8 582 aaKnown RBP21.46■■□□□ 1.03
ACTN4-202ENST00000390009 EP400Q96L91 3159 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 FIBPO43427 364 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 PRC1O43663 620 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 PDIA3P30101 505 aaKnown RBP21.46■■□□□ 1.03
ACTN4-202ENST00000390009 LRP2BPQ9P2M1 347 aa21.46■■□□□ 1.03
ACTN4-202ENST00000390009 MYH13Q9UKX3 1938 aa21.45■■□□□ 1.02
ACTN4-202ENST00000390009 EVCP57679 992 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms