RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 E7EWF7 191 aa13.27□□□□□ -0.29
CCDC149-202ENST00000389609 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
CCDC149-202ENST00000389609 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
CCDC149-202ENST00000389609 KIF18AQ8NI77 898 aa13.27□□□□□ -0.29
CCDC149-202ENST00000389609 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
CCDC149-202ENST00000389609 EYA2O00167 538 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 NRDCO43847 1150 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 TPM4P67936 248 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC129Q6ZRS4 1044 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
CCDC149-202ENST00000389609 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
CCDC149-202ENST00000389609 NDUFB9Q9Y6M9 179 aa13.26□□□□□ -0.29
CCDC149-202ENST00000389609 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
CCDC149-202ENST00000389609 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 DHX40Q8IX18 779 aaKnown RBP13.25□□□□□ -0.29
CCDC149-202ENST00000389609 DDX11Q96FC9 970 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 MAST3O60307 1309 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 PSDA5PKW4 1024 aaPredicted RBP13.25□□□□□ -0.29
CCDC149-202ENST00000389609 CCP110O43303 1012 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 LRMPQ12912 555 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 DDX46Q7L014 1031 aaKnown RBP13.25□□□□□ -0.29
CCDC149-202ENST00000389609 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 FAM53CQ9NYF3 392 aa13.25□□□□□ -0.29
CCDC149-202ENST00000389609 CHGBP05060 677 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CAPN2P17655 700 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 C11orf57Q6ZUT1 292 aaPredicted RBP13.24□□□□□ -0.29
CCDC149-202ENST00000389609 KRT222Q8N1A0 295 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 FSIP1Q8NA03 581 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 LINC00301Q8NCQ3 95 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 GOLPH3LQ9H4A5 285 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 IKBKBO14920 756 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CCZ1BP86790 482 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CCZ1P86791 482 aaPredicted RBP13.24□□□□□ -0.29
CCDC149-202ENST00000389609 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 PTPN14Q15678 1187 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC144BQ3MJ40 725 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC144CPQ8IYA2 1237 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 ELOA2Q8IYF1 753 aaPredicted RBP13.24□□□□□ -0.29
CCDC149-202ENST00000389609 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 C16orf45Q96MC5 204 aaPredicted RBP13.24□□□□□ -0.29
CCDC149-202ENST00000389609 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 NRBP1Q9UHY1 535 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
CCDC149-202ENST00000389609 MAP3K15Q6ZN16 1313 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 GOLIM4O00461 696 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
CCDC149-202ENST00000389609 ATF3P18847 181 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
CCDC149-202ENST00000389609 IMMTQ16891 758 aaKnown RBP13.23□□□□□ -0.29
CCDC149-202ENST00000389609 PLA2G12BQ9BX93 195 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 KIAA1468Q9P260 1216 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 ATRNO75882 1429 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
CCDC149-202ENST00000389609 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 ATP5J2-PTCD1G3V325 749 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 SKILP12757 684 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 ME1P48163 572 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 CABP4P57796 275 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 ZNF512BQ96KM6 892 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 CCAR2Q8N163 923 aaKnown RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 NOL10Q9BSC4 688 aaKnown RBP13.22□□□□□ -0.29
CCDC149-202ENST00000389609 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
CCDC149-202ENST00000389609 KCPQ6ZWJ8 1503 aa13.21□□□□□ -0.29
CCDC149-202ENST00000389609 CMA1P23946 247 aa13.21□□□□□ -0.29
CCDC149-202ENST00000389609 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
CCDC149-202ENST00000389609 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
CCDC149-202ENST00000389609 APPBP2Q92624 585 aa13.21□□□□□ -0.29
CCDC149-202ENST00000389609 NBPF26B4DH59 902 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 CDKL5O76039 1030 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NLRP12P59046 1061 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NBPF14Q5TI25 921 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.3
CCDC149-202ENST00000389609 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.3
CCDC149-202ENST00000389609 NBPF15Q8N660 670 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 JMYQ8N9B5 988 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 C8orf76Q96K31 380 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 L2HGDHQ9H9P8 463 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.3
CCDC149-202ENST00000389609 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
CCDC149-202ENST00000389609 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
CCDC149-202ENST00000389609 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
CCDC149-202ENST00000389609 SPTLC2O15270 562 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms