RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TNNI2P48788 182 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 GDF6Q6KF10 455 aaPredicted RBP8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 KIAA0825Q8IV33 1275 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 UBXN4Q92575 508 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 SPON2Q9BUD6 331 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 MUC3BQ9H195 1237 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 NAGPAQ9UK23 515 aa8.4□□□□□ -1.06
RNU6-40P-201ENST00000384254 MINDY4BA8MYZ0 360 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 CELA3AP09093 270 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 DNAJA1P31689 397 aaKnown RBP8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 LIG3P49916 1009 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 ARID5AQ03989 594 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 PCDH1Q08174 1060 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 SLCO4C1Q6ZQN7 724 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 FCHSD1Q86WN1 690 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 NECAB3Q96P71 396 aaPredicted RBP8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
RNU6-40P-201ENST00000384254 F6X3S4 739 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 CDC27P30260 824 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 PAK2Q13177 524 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 GPR161Q8N6U8 529 aaKnown RBP8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 TTC9Q92623 222 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 GPRASP2Q96D09 838 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 SPATA32Q96LK8 384 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 ADAM19Q9H013 955 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
RNU6-40P-201ENST00000384254 ATP2B1P20020 1258 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 EIF4A3P38919 411 aaKnown RBP8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 SRSF11Q05519 484 aaKnown RBP8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 IKBKEQ14164 716 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 SNAP47Q5SQN1 464 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 KANK3Q6NY19 840 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 IRF7Q92985 503 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 JPH1Q9HDC5 661 aaPredicted RBP8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
RNU6-40P-201ENST00000384254 ENC1O14682 589 aa8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 TERTO14746 1132 aaKnown RBP8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 B3GALT4O96024 378 aa8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 ZNF157P51786 506 aaPredicted RBP8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 FAAP100Q0VG06 881 aa8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 PCNX4Q63HM2 1172 aa8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
RNU6-40P-201ENST00000384254 GJA8P48165 433 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 ARL4DP49703 201 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 MAP3K10Q02779 954 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 LRRC14Q15048 493 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 PHC3Q8NDX5 983 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 SH2B1Q9NRF2 756 aaPredicted RBP8.35□□□□□ -1.07
RNU6-40P-201ENST00000384254 H3BRJ5 948 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 LILRB5O75023 590 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 EPXP11678 715 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 NME2P22392 152 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 HNRNPUQ00839 825 aaKnown RBP eCLIP8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 LMNB2Q03252 620 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 RNFT1Q5M7Z0 435 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 VN1R5Q7Z5H4 357 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 RHOVQ96L33 236 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 MDFIQ99750 246 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 ADAMTS1Q9UHI8 967 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 TLR6Q9Y2C9 796 aa8.34□□□□□ -1.07
RNU6-40P-201ENST00000384254 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 PF4P02776 101 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 AMPD1P23109 780 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 FAM160A1Q05DH4 1040 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 CAMK2GQ13555 558 aaPredicted RBP8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 SULF2Q8IWU5 870 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 GMLQ99445 158 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 CYP8B1Q9UNU6 501 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 PPME1Q9Y570 386 aa8.33□□□□□ -1.08
RNU6-40P-201ENST00000384254 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 PAGE1O75459 146 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 EPHA1P21709 976 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 CDC25BP30305 580 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 AP3B2Q13367 1082 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 LLGL2Q6P1M3 1020 aa8.32□□□□□ -1.08
RNU6-40P-201ENST00000384254 WFDC8Q8IUA0 241 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms