RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 MS4A3Q96HJ5 214 aa7.4□□□□□ -1.22
SREK1-203ENST00000380918 TRIM56Q9BRZ2 755 aaKnown RBP7.4□□□□□ -1.22
SREK1-203ENST00000380918 ADAM33Q9BZ11 813 aa7.4□□□□□ -1.22
SREK1-203ENST00000380918 RBSNQ9H1K0 784 aa7.4□□□□□ -1.22
SREK1-203ENST00000380918 UPF2Q9HAU5 1272 aaKnown RBP7.4□□□□□ -1.22
SREK1-203ENST00000380918 SH3BP1Q9Y3L3 701 aa7.4□□□□□ -1.22
SREK1-203ENST00000380918 RTEL1-TNFRSF6BF6WH68 1400 aa7.4□□□□□ -1.22
SREK1-203ENST00000380918 A6NHS1 94 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 VDRP11473 427 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 STAT3P40763 770 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 GUCY2FP51841 1108 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 ALG1LQ6GMV1 187 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 TSPAN18Q96SJ8 248 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 GTPBP4Q9BZE4 634 aaKnown RBP7.4□□□□□ -1.23
SREK1-203ENST00000380918 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.23
SREK1-203ENST00000380918 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 MAPK8IP3Q9UPT6 1336 aa7.4□□□□□ -1.23
SREK1-203ENST00000380918 LETM1O95202 739 aaPredicted RBP7.39□□□□□ -1.23
SREK1-203ENST00000380918 IGHDP01880 384 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 IFIT2P09913 472 aaKnown RBP7.39□□□□□ -1.23
SREK1-203ENST00000380918 RBP3P10745 1247 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 DDX46Q7L014 1031 aaKnown RBP7.39□□□□□ -1.23
SREK1-203ENST00000380918 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
SREK1-203ENST00000380918 CHMP7Q8WUX9 453 aaPredicted RBP7.39□□□□□ -1.23
SREK1-203ENST00000380918 POLIQ9UNA4 740 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 TRIM35Q9UPQ4 493 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 MTUS2Q5JR59 1369 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 PARD3Q8TEW0 1356 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 CTHP32929 405 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.39□□□□□ -1.23
SREK1-203ENST00000380918 DGKHQ86XP1 1220 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 TEX19Q8NA77 164 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 NELL1Q92832 810 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 NGRNQ9NPE2 291 aaKnown RBP7.39□□□□□ -1.23
SREK1-203ENST00000380918 IPPQ9Y573 584 aa7.39□□□□□ -1.23
SREK1-203ENST00000380918 VSTM5A8MXK1 200 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 SMAD7O15105 426 aaKnown RBP7.38□□□□□ -1.23
SREK1-203ENST00000380918 ZRANB2O95218 330 aaKnown RBP eCLIP7.38□□□□□ -1.237e-7■■■□□ 18.1
SREK1-203ENST00000380918 USP46P62068 366 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 CBX1P83916 185 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 SETDB1Q15047 1291 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 PDXDC1Q6P996 788 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 PANK3Q9H999 370 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.38□□□□□ -1.23
SREK1-203ENST00000380918 FGD5Q6ZNL6 1462 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 A0A087X0B3 334 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 TCEA3O75764 348 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 RASGRP1O95267 797 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 AGR2O95994 175 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 NEK2P51955 445 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 APOBRQ0VD83 1088 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 SASS6Q6UVJ0 657 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 STRA8Q7Z7C7 330 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 PARD3BQ8TEW8 1205 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 MTMR8Q96EF0 704 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 EAF1Q96JC9 268 aaPredicted RBP7.38□□□□□ -1.23
SREK1-203ENST00000380918 ZNF608Q9ULD9 1512 aaPredicted RBP7.38□□□□□ -1.23
SREK1-203ENST00000380918 LRRIQ1Q96JM4 1722 aa7.38□□□□□ -1.23
SREK1-203ENST00000380918 SUPT6HQ7KZ85 1726 aaKnown RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 CFTRP13569 1480 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 NCOA3Q9Y6Q9 1424 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 PDE8AO60658 829 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 EIF4BP23588 611 aaKnown RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 MLC1Q15049 377 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 MORC1Q86VD1 984 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 RSPH1Q8WYR4 309 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 SEC16BQ96JE7 1060 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 EIF2AK1Q9BQI3 630 aaKnown RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 CDH19Q9H159 772 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 SAGE1Q9NXZ1 904 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 ASAP1Q9ULH1 1129 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 FAM50BQ9Y247 325 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 A6NCN8 305 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 DUSP27Q5VZP5 1158 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 HOOK2Q96ED9 719 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 GPR101Q96P66 508 aaPredicted RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 IFT122Q9HBG6 1241 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 PPT2Q9UMR5 302 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 NOL7Q9UMY1 257 aaKnown RBP7.37□□□□□ -1.23
SREK1-203ENST00000380918 MAPK8IP1Q9UQF2 711 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 PCDHGB3Q9Y5G1 929 aa7.37□□□□□ -1.23
SREK1-203ENST00000380918 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 PLEKHH1Q9ULM0 1364 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 RAPGEF3O95398 923 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 LMNB1P20700 586 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 HALP42357 657 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 PPM1FP49593 454 aaPredicted RBP7.36□□□□□ -1.23
SREK1-203ENST00000380918 MAP7D1Q3KQU3 841 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 C2orf27AQ580R0 203 aa7.36□□□□□ -1.23
SREK1-203ENST00000380918 CT47A1Q5JQC4 288 aaPredicted RBP7.36□□□□□ -1.23
SREK1-203ENST00000380918 USPL1Q5W0Q7 1092 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms