RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 GOLGA6CA6NDK9 693 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 GOLGA6DP0CG33 693 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 ZYXQ15942 572 aaKnown RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 JADE2Q9NQC1 790 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 U3KPZ7 1027 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 ZNF500O60304 480 aaPredicted RBP12.15□□□□□ -0.46
CLCN4-202ENST00000380833 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
CLCN4-202ENST00000380833 PPP1R14CQ8TAE6 165 aa12.15□□□□□ -0.47
CLCN4-202ENST00000380833 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.47
CLCN4-202ENST00000380833 CCDC7Q96M83 1385 aa12.15□□□□□ -0.47
CLCN4-202ENST00000380833 NESP48681 1621 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 PALMDQ9NP74 551 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 NAIPQ13075 1403 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 A0A087WUV0 522 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 ZBTB16Q05516 673 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 EAPPQ56P03 285 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 KIAA1524Q8TCG1 905 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 EMILIN1Q9Y6C2 1016 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 EVCP57679 992 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 ERBINQ96RT1 1412 aa12.14□□□□□ -0.47
CLCN4-202ENST00000380833 RRBP1Q9P2E9 1410 aaKnown RBP12.14□□□□□ -0.47
CLCN4-202ENST00000380833 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 AFMP43652 599 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 ELF2Q15723 593 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 GFAPP14136 432 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 POLE2P56282 527 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 PLIN2Q99541 437 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 SORBS3O60504 671 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 PCYT1AP49585 367 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 TMCO4Q5TGY1 634 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 CALML4Q96GE6 196 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 XAB2Q9HCS7 855 aaKnown RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 FERP16591 822 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
CLCN4-202ENST00000380833 SCAND2PQ9GZW5 306 aaPredicted RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
CLCN4-202ENST00000380833 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 HIP1RO75146 1068 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 PPARDQ03181 441 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 VPS36Q86VN1 386 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 RAB3IPQ96QF0 476 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 NUB1Q9Y5A7 615 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 MAGEA9P43362 315 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 HELBQ8NG08 1087 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 OPHN1O60890 802 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 GKAP1Q5VSY0 366 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 ACRBPQ8NEB7 543 aa12.12□□□□□ -0.47
CLCN4-202ENST00000380833 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
CLCN4-202ENST00000380833 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 NDC80O14777 642 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
CLCN4-202ENST00000380833 MX1P20591 662 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 FYCO1Q9BQS8 1478 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 SYT10Q6XYQ8 523 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 AMOTL2Q9Y2J4 779 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 PPP2R5CQ13362 524 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
CLCN4-202ENST00000380833 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 ZNF165P49910 485 aa12.11□□□□□ -0.47
CLCN4-202ENST00000380833 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms